Gene: Solyc06g072790.3
General Information
Structural Information
- Species Solanum lycopersicum
- Gene Identifier Solyc06g072790.3
- Transcript Identifier Solyc06g072790.3.1
- Gene Type Coding gene
- Location SL4.0ch06 : 42552494-42558819 : positive
Gene Family Information
- ID HOM05D003872
- #Genes/#Species 179/97
- Phylogenetic origin
- ID ORTHO05D004592
- #Genes/#Species 176/97
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- tid Solyc06g072790.3.1
- uniprot A0A3Q7H1V6
- gene_id Solyc06g072790
Descriptions
- Description RING/U-box superfamily protein (AHRD V3.3 *** A0A1P8ASM3_ARATH)
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0030433 | ISO | PLAZA Integrative Orthology | ubiquitin-dependent ERAD pathway | AT1G65040 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT3G16090 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0016021 | IEA | GOA Database | integral component of membrane | |
| GO:0016020 | IEA | GOA Database | membrane | |
| GO:0005886 | ISO | PLAZA Integrative Orthology | plasma membrane | AT1G65040 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 19.2.4.2.1.1 | Protein homeostasis.ubiquitin-proteasome system.membrane-associated protein degradation.ER-associated protein degradation (ERAD).HRD1 E3 ubiquitin ligase complex.E3 ubiquitin ligase component HRD1 |