Gene: Solyc06g071880.4
General Information
Structural Information
- Species Solanum lycopersicum
- Gene Identifier Solyc06g071880.4
- Transcript Identifier Solyc06g071880.4.1
- Gene Type Coding gene
- Location SL4.0ch06 : 41949081-41950850 : negative
Gene Family Information
- ID HOM05D001171
- #Genes/#Species 529/100
- Phylogenetic origin
- ID ORTHO05D001872
- #Genes/#Species 343/97
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
Labels
Identifiers
- tid Solyc06g071880.4.1
- uniprot A0A3Q7H1B1
- gene_id Solyc06g071880
Descriptions
- Description 60S ribosomal protein L17 (AHRD V3.3 *** A0A2I0X0J2_9ASPA)
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0002181 | IBA | GOA Database | cytoplasmic translation | |
| GO:0006412 | IEA | GOA Database | translation | |
| GO:0006412 | IEA | InterPro | translation |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003729 | ISO | PLAZA Integrative Orthology | mRNA binding | AT1G67430 |
| GO:0003735 | IBA IEA | GOA Database | structural constituent of ribosome | |
| GO:0003735 | IEA | InterPro | structural constituent of ribosome |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0042788 | ISO | PLAZA Integrative Orthology | polysomal ribosome | AT1G67430 |
| GO:0005886 | ISO | PLAZA Integrative Orthology | plasma membrane | AT1G27400 |
| GO:0005773 | ISO | PLAZA Integrative Orthology | vacuole | AT1G67430 |
| GO:0005774 | ISO | PLAZA Integrative Orthology | vacuolar membrane | AT1G27400 |
| GO:0005730 | ISO | PLAZA Integrative Orthology | nucleolus | AT1G67430 |
| GO:0005829 | ISO | PLAZA Integrative Orthology | cytosol | AT1G27400 |
| GO:0022626 | ISO | PLAZA Integrative Orthology | cytosolic ribosome | AT1G67430 |
| GO:0009506 | ISO | PLAZA Integrative Orthology | plasmodesma | AT1G67430 |
| GO:0022625 | IBA | GOA Database | cytosolic large ribosomal subunit | |
| GO:0015934 | IEA | GOA Database | large ribosomal subunit | |
| GO:0015934 | IEA | InterPro | large ribosomal subunit | |
| GO:0005840 | IEA | GOA Database | ribosome | |
| GO:0005840 | IEA | InterPro | ribosome |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 17.1.2.1.17 | Protein biosynthesis.ribosome biogenesis.large ribosomal subunit (LSU).LSU proteome.component RPL17 |