Gene: Solyc06g068610.3
General Information
Structural Information
- Species Solanum lycopersicum
- Gene Identifier Solyc06g068610.3
- Transcript Identifier Solyc06g068610.3.1
- Gene Type Coding gene
- Location SL4.0ch06 : 40161395-40162657 : positive
Gene Family Information
- ID HOM05D001199
- #Genes/#Species 522/95
- Phylogenetic origin
- ID ORTHO05D001013
- #Genes/#Species 518/96
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- tid Solyc06g068610.3.1
- uniprot A0A3Q7GX14
- gene_id Solyc06g068610
Descriptions
- Description Transcriptional regulator of RNA polII, SAGA, subunit (AHRD V3.3 *** Q58G10_ARATH)
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0045893 | IEA | GOA Database | positive regulation of transcription, DNA-templated | |
| GO:0006357 | IBA | GOA Database | regulation of transcription by RNA polymerase II |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003713 | IBA | GOA Database | transcription coactivator activity | |
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT2G24530 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0070461 | IEA | GOA Database | SAGA-type complex | |
| GO:0070461 | IEA | InterPro | SAGA-type complex | |
| GO:0005634 | IEA | GOA Database | nucleus | |
| GO:0000124 | IBA | GOA Database | SAGA complex |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR024738 | Transcriptional coactivator Hfi1/Transcriptional adapter 1 |
| Mapman id | Description |
|---|---|
| 15.3.4.3.3.2 | RNA biosynthesis.RNA polymerase II-dependent transcription.transcription co-activation.SAGA complex.SPT recruitment module.component ADA1 |