Gene: Solyc06g063100.3

General Information

Structural Information

Species Solanum lycopersicum
Gene Identifier Solyc06g063100.3
Transcript Identifier Solyc06g063100.3.1
Gene Type Coding gene
Location SL4.0ch06 : 37509926-37513131 : positive

Gene Family Information

Homologous GF
Orthologous GF

ID HOM05D001728
#Genes/#Species 375/99
Phylogenetic origin

ID ORTHO05D004321
#Genes/#Species 184/99
Phylogenetic origin

Gene Duplication Information

Block Duplication Block duplicate

Labels

Identifiers

tid Solyc06g063100.3.1
uniprot K4C741
gene_id Solyc06g063100

Descriptions

Short descriptions
Ortholog descriptions

Description Ubiquitin-conjugating enzyme (AHRD V3.3 *** A0A200PV82_9MAGN)

Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0000209	IBA	GOA Database	protein polyubiquitination
GO:0030433	IBA	GOA Database	ubiquitin-dependent ERAD pathway
GO:1902457	ISO	PLAZA Integrative Orthology	negative regulation of stomatal opening	AT5G50430
GO:0042631	ISO	PLAZA Integrative Orthology	cellular response to water deprivation	AT5G50430
GO:0006511	ISO	PLAZA Integrative Orthology	ubiquitin-dependent protein catabolic process	AT1G17280

Molecular Function

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0061631	IBA	GOA Database	ubiquitin conjugating enzyme activity
GO:0004842	ISO	PLAZA Integrative Orthology	ubiquitin-protein transferase activity	AT1G17280
GO:0005515	ISO	PLAZA Integrative Orthology	protein binding	AT5G50430

Cellular Component

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0016021	IEA	GOA Database	integral component of membrane
GO:0016020	IEA	GOA Database	membrane
GO:0005783	IBA	GOA Database	endoplasmic reticulum
GO:0005634	IBA	GOA Database	nucleus

Color Legend

Experimental Evidence

Computational Reviewed Evidence

Electronic Evidence

InterPro	Description
IPR000608	Ubiquitin-conjugating enzyme E2
IPR016135	Ubiquitin-conjugating enzyme/RWD-like

Mapman id	Description
19.2.1.1.1.3	Protein homeostasis.ubiquitin-proteasome system.N-degron pathways.Ac/N-degron pathway.Doa10 E3 ubiquitin ligase complex.E2 ubiquitin-conjugating component Ubc33/34
19.2.2.1.3	Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation.ubiquitin conjugation (ubiquitylation).ubiquitin-conjugating E2 protein (UBC)