Gene: Solyc06g062500.4
General Information
Structural Information
- Species Solanum lycopersicum
- Gene Identifier Solyc06g062500.4
- Transcript Identifier Solyc06g062500.4.1
- Gene Type Coding gene
- Location SL4.0ch06 : 37085423-37087033 : positive
Gene Family Information
- ID HOM05D002382
- #Genes/#Species 285/97
- Phylogenetic origin
- ID ORTHO05D002622
- #Genes/#Species 274/97
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- tid Solyc06g062500.4.1
- uniprot A0A3Q7GXW8
- gene_id Solyc06g062500
Descriptions
- Description 60S ribosomal protein L28 (AHRD V3.3 *** B3TLS3_ELAGV)
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009955 | ISO | PLAZA Integrative Orthology | adaxial/abaxial pattern specification | AT2G19730 |
| GO:0009965 | ISO | PLAZA Integrative Orthology | leaf morphogenesis | AT2G19730 |
| GO:0006412 | IEA | GOA Database | translation | |
| GO:0006412 | IEA | InterPro | translation |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003729 | ISO | PLAZA Integrative Orthology | mRNA binding | AT2G19730 |
| GO:0003735 | IEA | GOA Database | structural constituent of ribosome | |
| GO:0003735 | IEA | InterPro | structural constituent of ribosome | |
| GO:0000976 | ISO | PLAZA Integrative Orthology | transcription cis-regulatory region binding | AT4G29410 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005618 | ISO | PLAZA Integrative Orthology | cell wall | AT2G19730 |
| GO:0005737 | ISO | PLAZA Integrative Orthology | cytoplasm | AT2G19730 |
| GO:0009506 | ISO | PLAZA Integrative Orthology | plasmodesma | AT2G19730 |
| GO:0009507 | ISO | PLAZA Integrative Orthology | chloroplast | AT2G19730 |
| GO:0005634 | ISO | PLAZA Integrative Orthology | nucleus | AT2G19730 |
| GO:0005654 | ISO | PLAZA Integrative Orthology | nucleoplasm | AT2G19730 |
| GO:0005886 | ISO | PLAZA Integrative Orthology | plasma membrane | AT2G19730 |
| GO:0005730 | ISO | PLAZA Integrative Orthology | nucleolus | AT2G19730 |
| GO:0022626 | ISO | PLAZA Integrative Orthology | cytosolic ribosome | AT2G19730 |
| GO:0022625 | IBA | GOA Database | cytosolic large ribosomal subunit | |
| GO:0005840 | IEA | GOA Database | ribosome | |
| GO:0005840 | IEA | InterPro | ribosome |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 17.1.2.1.29 | Protein biosynthesis.ribosome biogenesis.large ribosomal subunit (LSU).LSU proteome.component RPL28 |