Gene: Solyc06g059750.3

General Information

Structural Information

  • Species Solanum lycopersicum
  • Gene Identifier Solyc06g059750.3
  • Transcript Identifier Solyc06g059750.3.1
  • Gene Type Coding gene
  • Location SL4.0ch06 : 35305729-35316580 : positive

Gene Family Information

  • ID HOM05D001175
  • #Genes/#Species 529/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Solyc06g059750.3.1
  • uniprot A0A3Q7GUE9
  • gene_id Solyc06g059750

Descriptions

  • Description Transcriptional corepressor SEUSS (AHRD V3.3 *** A0A2G2WJJ1_CAPBA)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006979
ISO
PLAZA Integrative Orthologyresponse to oxidative stress AT1G43850
GO:0071217
ISO
PLAZA Integrative Orthologycellular response to external biotic stimulus AT1G43850
GO:0048481
ISO
PLAZA Integrative Orthologyplant ovule development AT1G43850
GO:0048467
ISO
PLAZA Integrative Orthologygynoecium development AT1G43850
GO:0009909
ISO
PLAZA Integrative Orthologyregulation of flower development AT1G43850
GO:0001666
ISO
PLAZA Integrative Orthologyresponse to hypoxia AT1G43850
GO:0009617
ISO
PLAZA Integrative Orthologyresponse to bacterium AT1G43850
GO:0000122
IBA
GOA Databasenegative regulation of transcription by RNA polymerase II
GO:0009733
ISO
PLAZA Integrative Orthologyresponse to auxin AT1G43850
GO:0009624
ISO
PLAZA Integrative Orthologyresponse to nematode AT1G43850
GO:0006974
ISO
PLAZA Integrative Orthologycellular response to DNA damage stimulus AT1G43850
GO:0009620
ISO
PLAZA Integrative Orthologyresponse to fungus AT1G43850
GO:0046898
ISO
PLAZA Integrative Orthologyresponse to cycloheximide AT1G43850
GO:0009793
ISO
PLAZA Integrative Orthologyembryo development ending in seed dormancy AT1G43850
GO:0007275
ISO
PLAZA Integrative Orthologymulticellular organism development AT1G43850
GO:0010272
ISO
PLAZA Integrative Orthologyresponse to silver ion AT1G43850
GO:0045944
IBA
GOA Databasepositive regulation of transcription by RNA polymerase II

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003714
ISO
PLAZA Integrative Orthologytranscription corepressor activity AT1G43850
GO:0046982
ISO
PLAZA Integrative Orthologyprotein heterodimerization activity AT1G43850
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT1G43850
GO:0003712
ISO
PLAZA Integrative Orthologytranscription coregulator activity AT1G43850
GO:0003677
ISO
PLAZA Integrative OrthologyDNA binding AT1G43850

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005667
IBA
GOA Databasetranscription regulator complex
GO:0005634
IBA
GOA Databasenucleus

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR029005 LIM-domain binding protein/SEUSS
Mapman id Description
15.5.51.6.2 RNA biosynthesis.transcriptional regulation.transcriptional repression.LEUNIG-SEUSS repressor complex.adapter component SEU/SLK