Gene: AT1G43850

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT1G43850
  • Transcript Identifier AT1G43850.1
  • Gene Type Coding gene
  • Location Chr1 : 16617872-16621596 : positive

Gene Family Information

  • ID HOM05D001175
  • #Genes/#Species 529/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT1G43850.1
  • symbol SEU
  • full_name seuss
  • uniprot Q8W234

Descriptions

  • Description SEUSS transcriptional co-regulator
  • Computational description seuss (SEU); BEST Arabidopsis thaliana protein match is: SEUSS-like 3 (TAIR:AT4G25515.1); Has 74651 Blast hits to 25837 proteins in 1166 species: Archae - 31; Bacteria - 2985; Metazoa - 26009; Fungi - 8425; Plants - 3606; Viruses - 613; Other Eukaryotes - 32982 (source: NCBI BLink).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0010272
IEP
Gene Ontologyresponse to silver ion1
GO:0030154
IEA
GOA Databasecell differentiation
GO:0009908
IEA
GOA Databaseflower development
GO:0045944
IBA
Gene Ontologypositive regulation of transcription by RNA polymerase II2
GO:0000122
IBA
Gene Ontologynegative regulation of transcription by RNA polymerase II2
GO:0048481
IMP
Gene Ontologyplant ovule development3
GO:0048467
IMP
Gene Ontologygynoecium development3
GO:0009793
IMP
Gene Ontologyembryo development ending in seed dormancy3
GO:0071217
IDA
Gene Ontologycellular response to external biotic stimulus1
GO:0046898
IEP
Gene Ontologyresponse to cycloheximide1
GO:0009733
IEP
Gene Ontologyresponse to auxin1
GO:0009624
IEP
Gene Ontologyresponse to nematode1
GO:0009620
IEP
Gene Ontologyresponse to fungus1
GO:0009617
IEP
Gene Ontologyresponse to bacterium1
GO:0006979
IEP
Gene Ontologyresponse to oxidative stress1
GO:0006974
IEP
Gene Ontologycellular response to DNA damage stimulus1
GO:0001666
IEP
Gene Ontologyresponse to hypoxia1
GO:0009909
IGI
Gene Ontologyregulation of flower development4
GO:0007275
IMP
Gene Ontologymulticellular organism development5

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003714
IDA
GOA Databasetranscription corepressor activity
GO:0003677
IDA
Gene OntologyDNA binding4
GO:0046982
IPI
Gene Ontologyprotein heterodimerization activity6
GO:0005515
IPI
Gene Ontologyprotein binding7
GO:0003712
IMP
Gene Ontologytranscription coregulator activity5

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
GOA Databasenucleus
GO:0005634
ISM, IBA
Gene Ontologynucleus2
GO:0005654
IEA
GOA Databasenucleoplasm
GO:0005667
IBA
Gene Ontologytranscription regulator complex2

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR029005 LIM-domain binding protein/SEUSS
Mapman id Description
15.5.51.6.2 RNA biosynthesis.transcriptional regulation.transcriptional repression.LEUNIG-SEUSS repressor complex.adapter component SEU/SLK