Gene: Solyc06g054490.3

General Information

Structural Information

  • Species Solanum lycopersicum
  • Gene Identifier Solyc06g054490.3
  • Transcript Identifier Solyc06g054490.3.1
  • Gene Type Coding gene
  • Location SL4.0ch06 : 35045313-35047872 : positive

Gene Family Information

  • ID HOM05D000373
  • #Genes/#Species 1301/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Solyc06g054490.3.1
  • uniprot A0A3Q7GUA9
  • gene_id Solyc06g054490

Descriptions

  • Description 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (AHRD V3.3 *** A0A2U1Q140_ARTAN)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0018401
ISO
PLAZA Integrative Orthologypeptidyl-proline hydroxylation to 4-hydroxy-L-proline AT3G06300
GO:0080147
ISO
PLAZA Integrative Orthologyroot hair cell development AT3G06300
GO:0006468
IEA
GOA Databaseprotein phosphorylation
GO:0016310
IEA
GOA Databasephosphorylation
GO:0019511
IEA
GOA Databasepeptidyl-proline hydroxylation

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005506
IEA
GOA Databaseiron ion binding
GO:0005506
IEA
InterProiron ion binding
GO:0031418
IEA
GOA DatabaseL-ascorbic acid binding
GO:0031418
IEA
InterProL-ascorbic acid binding
GO:0016705
IEA
GOA Databaseoxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
GO:0016705
IEA
InterProoxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
GO:0004672
IEA
GOA Databaseprotein kinase activity
GO:0016301
IEA
GOA Databasekinase activity
GO:0016491
IEA
GOA Databaseoxidoreductase activity
GO:0016740
IEA
GOA Databasetransferase activity
GO:0046872
IEA
GOA Databasemetal ion binding
GO:0051213
IEA
GOA Databasedioxygenase activity
GO:0004656
IEA
GOA Databaseprocollagen-proline 4-dioxygenase activity
GO:0005524
IEA
GOA DatabaseATP binding
GO:0000166
IEA
GOA Databasenucleotide binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005783
IEA
GOA Databaseendoplasmic reticulum
GO:0005794
ISO
PLAZA Integrative OrthologyGolgi apparatus AT3G06300
GO:0005768
ISO
PLAZA Integrative Orthologyendosome AT3G06300
GO:0005802
ISO
PLAZA Integrative Orthologytrans-Golgi network AT3G06300
GO:0005789
IEA
GOA Databaseendoplasmic reticulum membrane
GO:0016020
IEA
GOA Databasemembrane

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR003582 ShKT domain
IPR045054 Prolyl 4-hydroxylase
IPR006620 Prolyl 4-hydroxylase, alpha subunit
IPR044862 Prolyl 4-hydroxylase alpha subunit, Fe(2+) 2OG dioxygenase domain
Mapman id Description
18.9.1 Protein modification.hydroxylation.prolyl hydroxylase