Gene: Solyc06g054400.3

General Information

Structural Information

  • Species Solanum lycopersicum
  • Gene Identifier Solyc06g054400.3
  • Transcript Identifier Solyc06g054400.3.1
  • Gene Type Coding gene
  • Location SL4.0ch06 : 34980055-34986851 : positive

Gene Family Information

  • ID HOM05D001552
  • #Genes/#Species 411/98
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Solyc06g054400.3.1
  • uniprot A0A3Q7GT69
  • gene_id Solyc06g054400

Descriptions

  • Description Eukaryotic translation initiation factor 5B (AHRD V3.3 *** A0A2G2WJG0_CAPBA)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006412
IEA
GOA Databasetranslation
GO:0006413
IEA
GOA Databasetranslational initiation

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003924
IEA
GOA DatabaseGTPase activity
GO:0003924
IEA
InterProGTPase activity
GO:0005525
IEA
GOA DatabaseGTP binding
GO:0005525
IEA
InterProGTP binding
GO:0003743
IBA
IEA
GOA Databasetranslation initiation factor activity
GO:0000166
IEA
GOA Databasenucleotide binding
GO:0003729
ISO
PLAZA Integrative OrthologymRNA binding AT1G76810

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005886
ISO
PLAZA Integrative Orthologyplasma membrane AT1G76810

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR027417 P-loop containing nucleoside triphosphate hydrolase
IPR000795 Translational (tr)-type GTP-binding domain
IPR036925 Translation initiation factor IF-2, domain 3 superfamily
IPR015760 Translation initiation factor IF- 2
IPR023115 Translation initiation factor IF- 2, domain 3
IPR004161 Translation elongation factor EFTu-like, domain 2
IPR009000 Translation protein, beta-barrel domain superfamily
IPR005225 Small GTP-binding protein domain
Mapman id Description
17.4.3.2 Protein biosynthesis.translation initiation.eIF2A-eIF5B initiator tRNA carrier complex.Met-tRNA positioning component eIF5B