Gene: Solyc06g051570.4

General Information

Structural Information

  • Species Solanum lycopersicum
  • Gene Identifier Solyc06g051570.4
  • Transcript Identifier Solyc06g051570.4.1
  • Gene Type Coding gene
  • Location SL4.0ch06 : 32850598-32867494 : negative

Gene Family Information

  • ID HOM05D002575
  • #Genes/#Species 264/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Solyc06g051570.4.1
  • uniprot A0A3Q7GS56
  • gene_id Solyc06g051570

Descriptions

  • Description NF-X1-type zinc finger protein NFXL2 (AHRD V3.3 *** A0A1U8GWD8_CAPAN)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006355
IBA
GOA Databaseregulation of transcription, DNA-templated
GO:2000037
ISO
PLAZA Integrative Orthologyregulation of stomatal complex patterning AT5G05660
GO:0042335
ISO
PLAZA Integrative Orthologycuticle development AT5G05660
GO:0010310
ISO
PLAZA Integrative Orthologyregulation of hydrogen peroxide metabolic process AT5G05660
GO:0007623
ISO
PLAZA Integrative Orthologycircadian rhythm AT5G05660
GO:0045893
ISO
PLAZA Integrative Orthologypositive regulation of transcription, DNA-templated AT5G05660
GO:0009908
ISO
PLAZA Integrative Orthologyflower development AT5G05660
GO:0045892
ISO
PLAZA Integrative Orthologynegative regulation of transcription, DNA-templated AT5G05660
GO:0009651
ISO
PLAZA Integrative Orthologyresponse to salt stress AT5G05660
GO:0006357
IEA
GOA Databaseregulation of transcription by RNA polymerase II

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000987
ISO
PLAZA Integrative Orthologycis-regulatory region sequence-specific DNA binding AT5G05660
GO:0000977
IBA
GOA DatabaseRNA polymerase II transcription regulatory region sequence-specific DNA binding
GO:0000981
IBA
GOA DatabaseDNA-binding transcription factor activity, RNA polymerase II-specific
GO:0008270
IEA
GOA Databasezinc ion binding
GO:0008270
IEA
InterProzinc ion binding
GO:0003700
IEA
GOA DatabaseDNA-binding transcription factor activity
GO:0003700
IEA
InterProDNA-binding transcription factor activity
GO:0046872
IEA
GOA Databasemetal ion binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IBA
IEA
GOA Databasenucleus
GO:0005634
IEA
InterPronucleus

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR000967 Zinc finger, NF-X1-type
IPR034078 Transcription factor NFX1 family
Mapman id Description
15.5.51.5 RNA biosynthesis.transcriptional regulation.transcriptional repression.transcriptional repressor (NF-X1)