Gene: Solyc06g048520.3

General Information

Structural Information

  • Species Solanum lycopersicum
  • Gene Identifier Solyc06g048520.3
  • Transcript Identifier Solyc06g048520.3.1
  • Gene Type Coding gene
  • Location SL4.0ch06 : 28870984-28878527 : negative

Gene Family Information

  • ID HOM05D002443
  • #Genes/#Species 278/96
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Solyc06g048520.3.1
  • uniprot A0A3Q7GUR1
  • gene_id Solyc06g048520

Descriptions

  • Description RING/U-box superfamily protein (AHRD V3.3 *** Q8L610_ARATH)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:1904294
IEA
GOA Databasepositive regulation of ERAD pathway
GO:1904294
IEA
InterPropositive regulation of ERAD pathway
GO:0016567
IEA
GOA Databaseprotein ubiquitination

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0061630
IBA
IEA
GOA Databaseubiquitin protein ligase activity
GO:0061630
IEA
InterProubiquitin protein ligase activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016020
IEA
GOA Databasemembrane
GO:0016021
IEA
GOA Databaseintegral component of membrane

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR001841 Zinc finger, RING-type
IPR013083 Zinc finger, RING/FYVE/PHD-type
IPR044235 RING finger and transmembrane domain-containing protein 1/2
Mapman id Description
35.1 not assigned.annotated