Gene: Solyc06g033890.3
General Information
Structural Information
- Species Solanum lycopersicum
- Gene Identifier Solyc06g033890.3
- Transcript Identifier Solyc06g033890.3.1
- Gene Type Coding gene
- Location SL4.0ch06 : 21127987-21128499 : positive
Gene Family Information
- ID HOM05D002720
- #Genes/#Species 253/92
- Phylogenetic origin
- ID ORTHO05D002901
- #Genes/#Species 255/94
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
Labels
Identifiers
- tid Solyc06g033890.3.1
- uniprot A0A3Q7GTY0
- gene_id Solyc06g033890
Descriptions
- Description DNA-directed RNA polymerase V subunit 7 (AHRD V3.3 *** A0A1U8FSY3_CAPAN)
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006352 | IEA | GOA Database | DNA-templated transcription, initiation | |
| GO:0006352 | IEA | InterPro | DNA-templated transcription, initiation |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003899 | IEA | GOA Database | DNA-directed 5'-3' RNA polymerase activity | |
| GO:0003899 | IEA | InterPro | DNA-directed 5'-3' RNA polymerase activity | |
| GO:0003727 | IBA | GOA Database | single-stranded RNA binding | |
| GO:0003697 | IBA | GOA Database | single-stranded DNA binding |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0000419 | ISO | PLAZA Integrative Orthology | RNA polymerase V complex | AT4G14660 |
| GO:0000418 | ISO | PLAZA Integrative Orthology | RNA polymerase IV complex | AT3G22900 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR045113 | RNA polymerase Rpb7-like |
| Mapman id | Description |
|---|---|
| 15.1.6.5 | RNA biosynthesis.DNA-dependent RNA polymerase (Pol) complexes.Pol I-V shared regulatory components.subunit 7 |