Gene: Solyc06g010100.2

General Information

Structural Information

  • Species Solanum lycopersicum
  • Gene Identifier Solyc06g010100.2
  • Transcript Identifier Solyc06g010100.2.1
  • Gene Type Coding gene
  • Location SL4.0ch06 : 4938298-4944496 : positive

Gene Family Information

  • ID HOM05D001528
  • #Genes/#Species 416/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Solyc06g010100.2.1
  • uniprot A0A3Q7GQJ5
  • gene_id Solyc06g010100

Descriptions

  • Description E3 sumo-protein ligase siz1 (AHRD V3.3 *-* A0A1J6KG69_NICAT)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0048589
ISO
PLAZA Integrative Orthologydevelopmental growth AT5G60410
GO:0010113
ISO
PLAZA Integrative Orthologynegative regulation of systemic acquired resistance AT5G60410
GO:0048481
ISO
PLAZA Integrative Orthologyplant ovule development AT5G60410
GO:0016036
ISO
PLAZA Integrative Orthologycellular response to phosphate starvation AT5G60410
GO:0010337
ISO
PLAZA Integrative Orthologyregulation of salicylic acid metabolic process AT5G60410
GO:0010247
ISO
PLAZA Integrative Orthologydetection of phosphate ion AT5G60410
GO:0050826
ISO
PLAZA Integrative Orthologyresponse to freezing AT5G60410
GO:0009826
ISO
PLAZA Integrative Orthologyunidimensional cell growth AT5G60410
GO:0051301
ISO
PLAZA Integrative Orthologycell division AT5G60410
GO:0009414
ISO
PLAZA Integrative Orthologyresponse to water deprivation AT5G60410
GO:0009910
ISO
PLAZA Integrative Orthologynegative regulation of flower development AT5G60410
GO:0040008
ISO
PLAZA Integrative Orthologyregulation of growth AT5G60410
GO:0009553
ISO
PLAZA Integrative Orthologyembryo sac development AT5G60410
GO:0090352
ISO
PLAZA Integrative Orthologyregulation of nitrate assimilation AT5G60410
GO:0009787
ISO
PLAZA Integrative Orthologyregulation of abscisic acid-activated signaling pathway AT5G60410
GO:0009864
ISO
PLAZA Integrative Orthologyinduced systemic resistance, jasmonic acid mediated signaling pathway AT5G60410
GO:0062210
ISO
PLAZA Integrative Orthologyshoot regeneration AT5G60410
GO:0010183
ISO
PLAZA Integrative Orthologypollen tube guidance AT5G60410
GO:2000070
ISO
PLAZA Integrative Orthologyregulation of response to water deprivation AT5G60410
GO:0010286
ISO
PLAZA Integrative Orthologyheat acclimation AT5G60410
GO:0016925
IBA
GOA Databaseprotein sumoylation

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0019789
ISO
PLAZA Integrative OrthologySUMO transferase activity AT5G60410
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT5G60410
GO:0004386
IEA
GOA Databasehelicase activity
GO:0004386
IEA
InterProhelicase activity
GO:0061665
IBA
GOA DatabaseSUMO ligase activity
GO:0008270
IEA
GOA Databasezinc ion binding
GO:0008270
IEA
InterProzinc ion binding
GO:0046872
IEA
GOA Databasemetal ion binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT5G60410

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR041677 DNA2/NAM7 helicase, helicase domain
IPR013083 Zinc finger, RING/FYVE/PHD-type
IPR041679 DNA2/NAM7 helicase-like, C-terminal
IPR027417 P-loop containing nucleoside triphosphate hydrolase
IPR045055 DNA2/NAM7-like helicase
IPR001965 Zinc finger, PHD-type
IPR011011 Zinc finger, FYVE/PHD-type
IPR004181 Zinc finger, MIZ-type
Mapman id Description
19.2.2.2.4.1 Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation.SUMO conjugation (sumoylation).SUMO E3 ligase activities.E3 ligase (SIZ1)