Gene: Solyc06g008940.4
General Information
Structural Information
- Species Solanum lycopersicum
- Gene Identifier Solyc06g008940.4
- Transcript Identifier Solyc06g008940.4.1
- Gene Type Coding gene
- Location SL4.0ch06 : 2869652-2877352 : positive
Gene Family Information
- ID HOM05D000280
- #Genes/#Species 1564/100
- Phylogenetic origin
- ID ORTHO05D003998
- #Genes/#Species 195/100
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- tid Solyc06g008940.4.1
- uniprot A0A3Q7HJU1
- gene_id Solyc06g008940
Descriptions
- Description Elongation factor Tu (AHRD V3.3 *** A0A2G2VZZ7_CAPBA)
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006414 | IBA IEA | GOA Database | translational elongation | |
| GO:0006414 | IEA | InterPro | translational elongation | |
| GO:0006412 | IEA | GOA Database | translation | |
| GO:0070125 | IBA | GOA Database | mitochondrial translational elongation |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003924 | IEA | GOA Database | GTPase activity | |
| GO:0003924 | IEA | InterPro | GTPase activity | |
| GO:0005525 | IEA | GOA Database | GTP binding | |
| GO:0005525 | IEA | InterPro | GTP binding | |
| GO:0003746 | IBA IEA | GOA Database | translation elongation factor activity | |
| GO:0003746 | IEA | InterPro | translation elongation factor activity | |
| GO:0046872 | IEA | GOA Database | metal ion binding | |
| GO:0000166 | IEA | GOA Database | nucleotide binding |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005739 | IBA | GOA Database | mitochondrion |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR027417 | P-loop containing nucleoside triphosphate hydrolase |
| IPR000795 | Translational (tr)-type GTP-binding domain |
| IPR004161 | Translation elongation factor EFTu-like, domain 2 |
| IPR009000 | Translation protein, beta-barrel domain superfamily |
| IPR009001 | Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal |
| IPR004160 | Translation elongation factor EFTu/EF1A, C-terminal |
| IPR041709 | Elongation factor Tu (EF-Tu), GTP-binding domain |
| IPR005225 | Small GTP-binding protein domain |
| IPR004541 | Translation elongation factor EFTu/EF1A, bacterial/organelle |
| IPR033720 | Elongation factor Tu, domain 2 |
| Mapman id | Description |
|---|---|
| 17.7.4.1 | Protein biosynthesis.organelle machinery.translation elongation.elongation factor (EF-Tu) |