Gene: Solyc05g055440.1
General Information
Structural Information
- Species Solanum lycopersicum
- Gene Identifier Solyc05g055440.1
- Transcript Identifier Solyc05g055440.1.1
- Gene Type Coding gene
- Location SL4.0ch05 : 64474252-64474695 : negative
Gene Family Information
- ID HOM05D000437
- #Genes/#Species 1181/100
- Phylogenetic origin
- ID ORTHO05D000324
- #Genes/#Species 1111/100
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- tid Solyc05g055440.1.1
- uniprot A0A3Q7GPE5
- gene_id Solyc05g055440
Descriptions
- Description Histone H2B (AHRD V3.3 *** A0A1U8HBK7_CAPAN)
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006334 | IBA | GOA Database | nucleosome assembly |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003677 | IBA IEA | GOA Database | DNA binding | |
| GO:0003677 | IEA | InterPro | DNA binding | |
| GO:0046982 | IEA | GOA Database | protein heterodimerization activity | |
| GO:0046982 | IEA | InterPro | protein heterodimerization activity | |
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT1G07790 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0000786 | IEA | GOA Database | nucleosome | |
| GO:0000786 | IEA | InterPro | nucleosome | |
| GO:0005694 | IEA | GOA Database | chromosome | |
| GO:0005634 | IEA | GOA Database | nucleus | |
| GO:0009507 | ISO | PLAZA Integrative Orthology | chloroplast | AT1G07790 |
| GO:0005730 | ISO | PLAZA Integrative Orthology | nucleolus | AT5G02570 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 12.1.1.2 | Chromatin organisation.chromatin structure.DNA wrapping.histone (H2B) |