Gene: Solyc05g054080.3

General Information

Structural Information

  • Species Solanum lycopersicum
  • Gene Identifier Solyc05g054080.3
  • Transcript Identifier Solyc05g054080.3.1
  • Gene Type Coding gene
  • Location SL4.0ch05 : 63440250-63447710 : positive

Gene Family Information

  • ID HOM05D002095
  • #Genes/#Species 318/96
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Solyc05g054080.3.1
  • uniprot A0A3Q7GPT7
  • gene_id Solyc05g054080

Descriptions

  • Description E3 ubiquitin-protein ligase-like protein (AHRD V3.3 *** A0A1B1LUK2_VITPS)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0043161
IBA
GOA Databaseproteasome-mediated ubiquitin-dependent protein catabolic process
GO:0045732
IBA
GOA Databasepositive regulation of protein catabolic process
GO:0000209
IBA
GOA Databaseprotein polyubiquitination
GO:0016567
IBA
GOA Databaseprotein ubiquitination
GO:0010150
ISO
PLAZA Integrative Orthologyleaf senescence AT4G12570
GO:0009753
ISO
PLAZA Integrative Orthologyresponse to jasmonic acid AT4G12570
GO:0042542
ISO
PLAZA Integrative Orthologyresponse to hydrogen peroxide AT4G12570

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0004842
IEA
GOA Databaseubiquitin-protein transferase activity
GO:0004842
IEA
InterProubiquitin-protein transferase activity
GO:0005515
IEA
InterProprotein binding
GO:0061630
IBA
GOA Databaseubiquitin protein ligase activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005737
IBA
GOA Databasecytoplasm

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR000569 HECT domain
IPR019956 Ubiquitin domain
IPR000626 Ubiquitin-like domain
IPR029071 Ubiquitin-like domain superfamily
IPR035983 HECT, E3 ligase catalytic domain
Mapman id Description
19.2.2.1.4.1.1 Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation.ubiquitin conjugation (ubiquitylation).ubiquitin-ligase E3 activities.HECT-type E3 ligase activities.monomeric E3 ubiquitin ligase (HECT)