Gene: Solyc05g050090.4
General Information
Structural Information
- Species Solanum lycopersicum
- Gene Identifier Solyc05g050090.4
- Transcript Identifier Solyc05g050090.4.1
- Gene Type Coding gene
- Location SL4.0ch05 : 59469431-59470417 : positive
Gene Family Information
- ID HOM05D001840
- #Genes/#Species 355/99
- Phylogenetic origin
- ID ORTHO05D002076
- #Genes/#Species 320/98
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- tid Solyc05g050090.4.1
- uniprot A0A3Q7HEH3
- gene_id Solyc05g050090
Descriptions
- Description Delta(8)-fatty-acid desaturase (AHRD V3.3 *** A0A2G2WSR6_CAPBA)
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006629 | IBA IEA | GOA Database | lipid metabolic process | |
| GO:0006629 | IEA | InterPro | lipid metabolic process | |
| GO:0070417 | ISO | PLAZA Integrative Orthology | cellular response to cold | AT3G61580 |
| GO:0030148 | ISO | PLAZA Integrative Orthology | sphingolipid biosynthetic process | AT3G61580 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0016491 | IEA | GOA Database | oxidoreductase activity | |
| GO:0016717 | IBA | GOA Database | oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water | |
| GO:0052631 | ISO | PLAZA Integrative Orthology | sphingolipid delta-8 desaturase activity | AT3G61580 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0016021 | IEA | GOA Database | integral component of membrane | |
| GO:0016020 | IEA | GOA Database | membrane | |
| GO:0005783 | ISO | PLAZA Integrative Orthology | endoplasmic reticulum | AT3G61580 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 5.4.10 | Lipid metabolism.sphingolipid biosynthesis.delta-8 sphingolipid desaturase (SLD) |