Gene: Solyc05g023750.3

General Information

Structural Information

  • Species Solanum lycopersicum
  • Gene Identifier Solyc05g023750.3
  • Transcript Identifier Solyc05g023750.3.1
  • Gene Type Coding gene
  • Location SL4.0ch05 : 29363265-29373662 : positive

Gene Family Information

  • ID HOM05D001362
  • #Genes/#Species 459/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Solyc05g023750.3.1
  • uniprot A0A3Q7HBQ3
  • gene_id Solyc05g023750

Descriptions

  • Description Adp-ribosylation factor gtpase-activating protein agd3 (AHRD V3.3 *** A0A314LCP5_NICAT)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009733
ISO
PLAZA Integrative Orthologyresponse to auxin AT5G13300
GO:0009965
ISO
PLAZA Integrative Orthologyleaf morphogenesis AT5G13300
GO:0006897
ISO
PLAZA Integrative Orthologyendocytosis AT5G13300
GO:0048768
ISO
PLAZA Integrative Orthologyroot hair cell tip growth AT5G61980
GO:0010051
ISO
PLAZA Integrative Orthologyxylem and phloem pattern formation AT5G13300
GO:0007010
ISO
PLAZA Integrative Orthologycytoskeleton organization AT5G61980
GO:0010087
ISO
PLAZA Integrative Orthologyphloem or xylem histogenesis AT5G13300
GO:0050790
IEA
GOA Databaseregulation of catalytic activity

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0035091
ISO
PLAZA Integrative Orthologyphosphatidylinositol binding AT5G13300
GO:0005515
IEA
InterProprotein binding
GO:0005096
IEA
GOA DatabaseGTPase activator activity
GO:0005096
IEA
InterProGTPase activator activity
GO:0046872
IEA
GOA Databasemetal ion binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0030140
ISO
PLAZA Integrative Orthologytrans-Golgi network transport vesicle AT5G13300
GO:0005829
ISO
PLAZA Integrative Orthologycytosol AT5G13300
GO:0035618
ISO
PLAZA Integrative Orthologyroot hair AT5G61980
GO:0030139
ISO
PLAZA Integrative Orthologyendocytic vesicle AT5G61980
GO:0005886
ISO
PLAZA Integrative Orthologyplasma membrane AT5G61980
GO:0005737
IEA
GOA Databasecytoplasm
GO:0005737
IEA
InterProcytoplasm

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR037278 ARFGAP/RecO-like zinc finger
IPR036770 Ankyrin repeat-containing domain superfamily
IPR002110 Ankyrin repeat
IPR001164 Arf GTPase activating protein
IPR038508 ArfGAP domain superfamily
IPR001849 Pleckstrin homology domain
IPR027267 AH/BAR domain superfamily
IPR004148 BAR domain
IPR035670 Plant AGD1/2/3/4, BAR domain
IPR011993 PH-like domain superfamily
Mapman id Description
22.3.2.3.1 Vesicle trafficking.post-Golgi trafficking.coat protein recruiting.ARF-GTPase activation.class I ARF-GAP protein