Gene: Solyc05g015650.3

General Information

Structural Information

  • Species Solanum lycopersicum
  • Gene Identifier Solyc05g015650.3
  • Transcript Identifier Solyc05g015650.3.1
  • Gene Type Coding gene
  • Location SL4.0ch05 : 11648398-11663300 : negative

Gene Family Information

  • ID HOM05D000660
  • #Genes/#Species 863/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Solyc05g015650.3.1
  • uniprot A0A3Q7GGC9
  • gene_id Solyc05g015650

Descriptions

  • Description Calmodulin-binding transcription activator 4 (AHRD V3.3 *** A0A2G2YFA1_CAPAN)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006357
IBA
GOA Databaseregulation of transcription by RNA polymerase II
GO:0006355
ISO
PLAZA Integrative Orthologyregulation of transcription, DNA-templated AT1G67310

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003677
IEA
GOA DatabaseDNA binding
GO:0003677
IEA
InterProDNA binding
GO:0005515
IEA
InterProprotein binding
GO:0005516
IEA
GOA Databasecalmodulin binding
GO:0003712
IBA
GOA Databasetranscription coregulator activity
GO:0003690
IBA
GOA Databasedouble-stranded DNA binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IBA
IEA
GOA Databasenucleus
GO:0005829
ISO
PLAZA Integrative Orthologycytosol AT1G67310

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR020683 Ankyrin repeat-containing domain
IPR013783 Immunoglobulin-like fold
IPR002909 IPT domain
IPR005559 CG-1 DNA-binding domain
IPR027417 P-loop containing nucleoside triphosphate hydrolase
IPR002110 Ankyrin repeat
IPR000048 IQ motif, EF-hand binding site
IPR036770 Ankyrin repeat-containing domain superfamily
IPR014756 Immunoglobulin E-set
Mapman id Description
15.5.26 RNA biosynthesis.transcriptional regulation.transcription factor (CAMTA)