Gene: Solyc05g014830.3

General Information

Structural Information

  • Species Solanum lycopersicum
  • Gene Identifier Solyc05g014830.3
  • Transcript Identifier Solyc05g014830.3.1
  • Gene Type Coding gene
  • Location SL4.0ch05 : 9096153-9099803 : negative

Gene Family Information

  • ID HOM05D000221
  • #Genes/#Species 1858/100
  • Phylogenetic origin
  • ID ORTHO05D392388
  • #Genes/#Species 1 / 1(orphan gene)
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Solyc05g014830.3.1
  • uniprot A0A3Q7GDL2
  • gene_id Solyc05g014830

Descriptions

  • Description Histone H2A (AHRD V3.3 *** A0A1U8EPA3_CAPAN)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006342
IBA
GOA Databasechromatin silencing

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0046982
IEA
GOA Databaseprotein heterodimerization activity
GO:0046982
IEA
InterProprotein heterodimerization activity
GO:0003677
IBA
IEA
GOA DatabaseDNA binding
GO:0003677
IEA
InterProDNA binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000786
IEA
GOA Databasenucleosome
GO:0000786
IEA
InterPronucleosome
GO:0005634
IEA
GOA Databasenucleus
GO:0005694
IEA
GOA Databasechromosome
GO:0016021
IEA
GOA Databaseintegral component of membrane
GO:0016020
IEA
GOA Databasemembrane

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR032454 Histone H2A, C-terminal domain
IPR009072 Histone-fold
IPR002119 Histone H2A
IPR007125 Histone H2A/H2B/H3
Mapman id Description
12.1.1.1 Chromatin organisation.chromatin structure.DNA wrapping.histone (H2A)