Gene: Solyc05g013970.4

General Information

Structural Information

  • Species Solanum lycopersicum
  • Gene Identifier Solyc05g013970.4
  • Transcript Identifier Solyc05g013970.4.1
  • Gene Type Coding gene
  • Location SL4.0ch05 : 7535870-7537810 : positive

Gene Family Information

  • ID HOM05D002413
  • #Genes/#Species 281/96
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Solyc05g013970.4.1
  • uniprot A0A3Q7GD86
  • gene_id Solyc05g013970

Descriptions

  • Description RNA recognition motif domain (AHRD V3.3 *-* A0A200R4F7_9MAGN)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003676
IEA
GOA Databasenucleic acid binding
GO:0003676
IEA
InterPronucleic acid binding
GO:0003723
IEA
GOA DatabaseRNA binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
GOA Databasenucleus

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR000504 RNA recognition motif domain
IPR012677 Nucleotide-binding alpha-beta plait domain superfamily
IPR034772 CPSF6/7 family
IPR035979 RNA-binding domain superfamily
Mapman id Description
16.3.1.4.2 RNA processing.RNA 3'-end processing.mRNA polyadenylation.Cleavage Factor I (CF-Im) complex.component CPFS6/CFIm68