Gene: Solyc05g013940.4

General Information

Structural Information

  • Species Solanum lycopersicum
  • Gene Identifier Solyc05g013940.4
  • Transcript Identifier Solyc05g013940.4.1
  • Gene Type Coding gene
  • Location SL4.0ch05 : 7473814-7479666 : negative

Gene Family Information

  • ID HOM05D000173
  • #Genes/#Species 2168/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Solyc05g013940.4.1
  • uniprot A0A3Q7GGI2
  • gene_id Solyc05g013940

Descriptions

  • Description Actin-related protein (AHRD V3.3 *** A0A200RCU3_9MAGN)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0034314
IBA
GOA DatabaseArp2/3 complex-mediated actin nucleation
GO:0009825
ISO
PLAZA Integrative Orthologymultidimensional cell growth AT1G13180
GO:0000902
ISO
PLAZA Integrative Orthologycell morphogenesis AT1G13180
GO:0007015
ISO
PLAZA Integrative Orthologyactin filament organization AT1G13180
GO:0010090
ISO
PLAZA Integrative Orthologytrichome morphogenesis AT1G13180

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0051015
IBA
GOA Databaseactin filament binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005885
IBA
GOA DatabaseArp2/3 protein complex
GO:0005829
ISO
PLAZA Integrative Orthologycytosol AT1G13180

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR004000 Actin family
IPR043129 ATPase, nucleotide binding domain
Mapman id Description
20.2.2.1.2 Cytoskeleton organisation.microfilament network.actin polymerisation.Arp2/3 actin polymerization initiation complex.component Arp3