Gene: Solyc05g013930.2

General Information

Structural Information

  • Species Solanum lycopersicum
  • Gene Identifier Solyc05g013930.2
  • Transcript Identifier Solyc05g013930.2.1
  • Gene Type Coding gene
  • Location SL4.0ch05 : 7449208-7452087 : negative

Gene Family Information

  • ID HOM05D000512
  • #Genes/#Species 1048/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Solyc05g013930.2.1
  • uniprot A0A3Q7H966
  • gene_id Solyc05g013930

Descriptions

  • Description Protein terminal ear1-like protein (AHRD V3.3 *** A0A2G3B8W0_CAPCH)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000398
IBA
GOA DatabasemRNA splicing, via spliceosome

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003676
IEA
GOA Databasenucleic acid binding
GO:0003676
IEA
InterPronucleic acid binding
GO:0003723
IBA
IEA
GOA DatabaseRNA binding
GO:0003729
IBA
GOA DatabasemRNA binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016607
IBA
GOA Databasenuclear speck

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR012677 Nucleotide-binding alpha-beta plait domain superfamily
IPR007201 Mei2-like, C-terminal RNA recognition motif
IPR035979 RNA-binding domain superfamily
IPR000504 RNA recognition motif domain
IPR034458 Terminal EAR1-like, RNA recognition motif 3
Mapman id Description
35.1 not assigned.annotated