Gene: Solyc05g013380.3

General Information

Structural Information

  • Species Solanum lycopersicum
  • Gene Identifier Solyc05g013380.3
  • Transcript Identifier Solyc05g013380.3.1
  • Gene Type Coding gene
  • Location SL4.0ch05 : 6530418-6536324 : positive

Gene Family Information

  • ID HOM05D001342
  • #Genes/#Species 469/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Solyc05g013380.3.1
  • uniprot A0A3Q7GG75
  • gene_id Solyc05g013380

Descriptions

  • Description Alanine aminotransferase 2 (AHRD V3.3 *** B6TXZ8_MAIZE)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0001666
ISO
PLAZA Integrative Orthologyresponse to hypoxia AT1G23310
GO:0009853
IBA
GOA Databasephotorespiration
GO:0009058
IEA
GOA Databasebiosynthetic process
GO:0009058
IEA
InterProbiosynthetic process

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0008453
IBA
GOA Databasealanine-glyoxylate transaminase activity
GO:0003729
ISO
PLAZA Integrative OrthologymRNA binding AT1G70580
GO:0047958
IBA
GOA Databaseglycine:2-oxoglutarate aminotransferase activity
GO:0004021
IBA
GOA DatabaseL-alanine:2-oxoglutarate aminotransferase activity
GO:0003824
IEA
GOA Databasecatalytic activity
GO:0003824
IEA
InterProcatalytic activity
GO:0030170
IEA
GOA Databasepyridoxal phosphate binding
GO:0030170
IEA
InterPropyridoxal phosphate binding
GO:0008483
IEA
GOA Databasetransaminase activity
GO:0008483
IEA
InterProtransaminase activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005773
ISO
PLAZA Integrative Orthologyvacuole AT1G23310
GO:0048046
ISO
PLAZA Integrative Orthologyapoplast AT1G23310
GO:0009507
ISO
PLAZA Integrative Orthologychloroplast AT1G70580
GO:0005777
ISO
PLAZA Integrative Orthologyperoxisome AT1G70580
GO:0009570
ISO
PLAZA Integrative Orthologychloroplast stroma AT1G70580

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR015421 Pyridoxal phosphate-dependent transferase, major domain
IPR015424 Pyridoxal phosphate-dependent transferase
IPR015422 Pyridoxal phosphate-dependent transferase, small domain
IPR004839 Aminotransferase, class I/classII
IPR045088 Aminotransferase ALAT1/2-like
Mapman id Description
1.3.3.1 Photosynthesis.photorespiration.aminotransferase activities.glutamate-glyoxylate transaminase