Gene: Solyc05g013050.3

General Information

Structural Information

  • Species Solanum lycopersicum
  • Gene Identifier Solyc05g013050.3
  • Transcript Identifier Solyc05g013050.3.1
  • Gene Type Coding gene
  • Location SL4.0ch05 : 6235654-6238459 : positive

Gene Family Information

  • ID HOM05D000944
  • #Genes/#Species 636/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Solyc05g013050.3.1
  • uniprot A0A3Q7H8M9
  • gene_id Solyc05g013050

Descriptions

  • Description Vesicle transport v-SNARE protein (AHRD V3.3 *** A0A0K0XR08_TOBAC)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006906
IBA
GOA Databasevesicle fusion
GO:0006623
ISO
PLAZA Integrative Orthologyprotein targeting to vacuole AT1G26670
GO:0006891
ISO
PLAZA Integrative Orthologyintra-Golgi vesicle-mediated transport AT1G26670
GO:0046907
ISO
PLAZA Integrative Orthologyintracellular transport AT1G26670
GO:0016192
IEA
GOA Databasevesicle-mediated transport
GO:0016192
IEA
InterProvesicle-mediated transport
GO:0006886
IEA
GOA Databaseintracellular protein transport
GO:0006886
IEA
InterProintracellular protein transport
GO:0015031
IEA
GOA Databaseprotein transport

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005483
ISO
PLAZA Integrative Orthologysoluble NSF attachment protein activity AT1G26670
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT1G26670
GO:0000149
IBA
GOA DatabaseSNARE binding
GO:0005484
IBA
IEA
GOA DatabaseSNAP receptor activity
GO:0005484
IEA
InterProSNAP receptor activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005886
ISO
PLAZA Integrative Orthologyplasma membrane AT1G26670
GO:0005770
ISO
PLAZA Integrative Orthologylate endosome AT1G26670
GO:0005768
ISO
PLAZA Integrative Orthologyendosome AT1G26670
GO:0005802
ISO
PLAZA Integrative Orthologytrans-Golgi network AT1G26670
GO:0031201
IBA
GOA DatabaseSNARE complex
GO:0005794
IBA
IEA
GOA DatabaseGolgi apparatus
GO:0005794
IEA
InterProGolgi apparatus
GO:0031902
IBA
GOA Databaselate endosome membrane
GO:0005789
IBA
GOA Databaseendoplasmic reticulum membrane
GO:0016020
IEA
GOA Databasemembrane
GO:0016020
IEA
InterPromembrane
GO:0012507
IBA
GOA DatabaseER to Golgi transport vesicle membrane
GO:0016021
IEA
GOA Databaseintegral component of membrane

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR010989 SNARE
IPR027027 GOSR2/Membrin/Bos1
IPR007705 Vesicle transport v-SNARE, N-terminal
IPR000727 Target SNARE coiled-coil homology domain
IPR038407 Vesicle transport v-SNARE, N-terminal domain superfamily
Mapman id Description
22.3.5.1.2.1 Vesicle trafficking.post-Golgi trafficking.target membrane fusion.membrane fusion complexes.Qb-type SNARE components.VTI-group component