Gene: Solyc05g007830.3
General Information
Structural Information
- Species Solanum lycopersicum
- Gene Identifier Solyc05g007830.3
- Transcript Identifier Solyc05g007830.3.1
- Gene Type Coding gene
- Location SL4.0ch05 : 2329532-2331250 : positive
Gene Family Information
- ID HOM05D000114
- #Genes/#Species 2914/98
- Phylogenetic origin
- ID ORTHO05D000075
- #Genes/#Species 2458/97
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- tid Solyc05g007830.3.1
- uniprot A0A3Q7GDR9
- gene_id Solyc05g007830
Descriptions
- Description expansin12
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009664 | IEA | GOA Database | plant-type cell wall organization | |
| GO:0009664 | IEA | InterPro | plant-type cell wall organization | |
| GO:0071555 | IEA | GOA Database | cell wall organization | |
| GO:0009828 | ISO | PLAZA Integrative Orthology | plant-type cell wall loosening | AT1G26770 |
| GO:0009739 | ISO | PLAZA Integrative Orthology | response to gibberellin | AT1G69530 |
| GO:0006949 | ISO | PLAZA Integrative Orthology | syncytium formation | AT1G26770 |
| GO:0010119 | ISO | PLAZA Integrative Orthology | regulation of stomatal movement | AT1G69530 |
| GO:0010114 | ISO | PLAZA Integrative Orthology | response to red light | AT1G69530 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005199 | ISO | PLAZA Integrative Orthology | structural constituent of cell wall | AT1G26770 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005576 | IEA | GOA Database | extracellular region | |
| GO:0005576 | IEA | InterPro | extracellular region | |
| GO:0016020 | IEA | GOA Database | membrane | |
| GO:0005618 | IEA | GOA Database | cell wall | |
| GO:0009505 | ISO | PLAZA Integrative Orthology | plant-type cell wall | AT1G26770 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR036908 | RlpA-like domain superfamily |
| IPR009009 | RlpA-like protein, double-psi beta-barrel domain |
| IPR036749 | Expansin, cellulose-binding-like domain superfamily |
| IPR007117 | Expansin, cellulose-binding-like domain |
| IPR007112 | Expansin/pollen allergen, DPBB domain |
| IPR002963 | Expansin |
| IPR007118 | Expansin/Lol pI |
| Mapman id | Description |
|---|---|
| 21.4.2.1 | Cell wall organisation.cell wall proteins.expansin activities.alpha-class expansin |