Gene: AT1G26770
General Information
Structural Information
- Species Arabidopsis thaliana
- Gene Identifier AT1G26770
- Transcript Identifier AT1G26770.1
- Gene Type Coding gene
- Location Chr1 : 9259805-9260792 : positive
Gene Family Information
- ID HOM05D000114
- #Genes/#Species 2914/98
- Phylogenetic origin
- ID ORTHO05D000075
- #Genes/#Species 2458/97
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- tid AT1G26770.1
- symbol EXPA10
- Alias AT-EXP10,ARABIDOPSIS THALIANA EXPANSIN 10,ATEXP10,ARABIDOPSIS THALIANA EXPANSIN 10,ATEXPA10,expansin A10,ATHEXP ALPHA 1.1,ARABIDOPSIS THALIANA EXPANSIN ALPHA 1.1,EXP10,EXPANSIN 10
- uniprot Q9LDR9
Descriptions
- Description expansin A10
- Computational description expansin A10 (EXPA10); CONTAINS InterPro DOMAIN/s: Pollen allergen, N-terminal (InterPro:IPR014734), Rare lipoprotein A (InterPro:IPR005132), Pollen allergen/expansin, C-terminal (InterPro:IPR007117), Barwin-related endoglucanase (InterPro:IPR009009), Expansin (InterPro:IPR002963), Expansin/Lol pI (InterPro:IPR007118), Expansin 45, endoglucanase-like (InterPro:IPR007112); BEST Arabidopsis thaliana protein match is: expansin A1 (TAIR:AT1G69530.2); Has 2216 Blast hits to 2213 proteins in 165 species: Archae - 0; Bacteria - 8; Metazoa - 0; Fungi - 52; Plants - 2112; Viruses - 0; Other Eukaryotes - 44 (source: NCBI BLink).
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0009664 | IEA | Gene Ontology | plant-type cell wall organization | |
GO:0009664 | IEA | InterPro | plant-type cell wall organization | |
GO:0009828 | IMP NAS | Gene Ontology | plant-type cell wall loosening | 1 2 |
GO:0009826 | NAS | Gene Ontology | unidimensional cell growth | 2 |
GO:0006949 | IEP | Gene Ontology | syncytium formation | 3 |
GO:0071555 | IEA | GOA Database | cell wall organization |
Molecular Function
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0005199 | TAS | Gene Ontology | structural constituent of cell wall | 1 |
Cellular Component
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0005576 | IEA | GOA Database | extracellular region | |
GO:0005576 | ISM | Gene Ontology | extracellular region | |
GO:0005576 | IEA | InterPro | extracellular region | |
GO:0009505 | TAS | Gene Ontology | plant-type cell wall | 1 |
GO:0016020 | IEA | GOA Database | membrane | |
GO:0005618 | IEA | GOA Database | cell wall |
Color Legend
Experimental Evidence |
Computational Reviewed Evidence |
Electronic Evidence |
InterPro | Description |
---|---|
IPR036908 | RlpA-like domain superfamily |
IPR009009 | RlpA-like protein, double-psi beta-barrel domain |
IPR036749 | Expansin, cellulose-binding-like domain superfamily |
IPR007112 | Expansin/pollen allergen, DPBB domain |
IPR007118 | Expansin/Lol pI |
IPR007117 | Expansin, cellulose-binding-like domain |
IPR002963 | Expansin |
Mapman id | Description |
---|---|
21.4.2.1 | Cell wall organisation.cell wall proteins.expansin activities.alpha-class expansin |