Gene: Solyc05g006930.3

General Information

Structural Information

  • Species Solanum lycopersicum
  • Gene Identifier Solyc05g006930.3
  • Transcript Identifier Solyc05g006930.3.1
  • Gene Type Coding gene
  • Location SL4.0ch05 : 1581554-1585930 : positive

Gene Family Information

  • ID HOM05D005453
  • #Genes/#Species 140/92
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Solyc05g006930.3.1
  • uniprot A0A3Q7GE12
  • gene_id Solyc05g006930

Descriptions

  • Description 5'-AMP-activated protein kinase subunit beta-2 (AHRD V3.3 *** A0A1J3EBW5_NOCCA)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0010581
ISO
PLAZA Integrative Orthologyregulation of starch biosynthetic process AT1G27070
GO:0019252
ISO
PLAZA Integrative Orthologystarch biosynthetic process AT1G27070
GO:2000014
ISO
PLAZA Integrative Orthologyregulation of endosperm development Os03g0686900

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT1G27070
GO:2001066
ISO
PLAZA Integrative Orthologyamylopectin binding Os03g0686900
GO:2001070
ISO
PLAZA Integrative Orthologystarch binding Os03g0686900
GO:2001071
ISO
PLAZA Integrative Orthologymaltoheptaose binding AT1G27070
GO:0030247
ISO
PLAZA Integrative Orthologypolysaccharide binding AT1G27070

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009507
ISO
PLAZA Integrative Orthologychloroplast AT1G27070

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR032640 AMP-activated protein kinase, glycogen-binding domain
IPR013783 Immunoglobulin-like fold
IPR014756 Immunoglobulin E-set
Mapman id Description
3.2.1.1 Carbohydrate metabolism.starch metabolism.granule initiation.initiation factor (PTST2)