Gene: Solyc05g005640.4

General Information

Structural Information

  • Species Solanum lycopersicum
  • Gene Identifier Solyc05g005640.4
  • Transcript Identifier Solyc05g005640.4.1
  • Gene Type Coding gene
  • Location SL4.0ch05 : 513430-524823 : negative

Gene Family Information

  • ID HOM05D190473
  • #Genes/#Species 1 / 1(orphan gene)
  • Phylogenetic origin
  • ID ORTHO05D480560
  • #Genes/#Species 1 / 1(orphan gene)
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Solyc05g005640.4.1
  • uniprot A0A3Q7GD99
  • gene_id Solyc05g005640

Descriptions

  • Description methyl-CpG-binding domain-containing protein 9-like (AHRD V3.3 *** A0A2I4FAS2_9ROSI)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IEA
InterProprotein binding
GO:0046872
IEA
GOA Databasemetal ion binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
GOA Databasenucleus

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR028942 WHIM1 domain
IPR036427 Bromodomain-like superfamily
IPR001965 Zinc finger, PHD-type
IPR019787 Zinc finger, PHD-finger
IPR018501 DDT domain
IPR011011 Zinc finger, FYVE/PHD-type
IPR028941 WHIM2 domain
IPR013083 Zinc finger, RING/FYVE/PHD-type
Mapman id Description
12.4.4.6 Chromatin organisation.nucleosome remodeling.SWR1 chromatin remodeling complex.methylation reader component MBD9