Gene: Solyc05g004000.1

General Information

Structural Information

  • Species Solanum lycopersicum
  • Gene Identifier Solyc05g004000.1
  • Transcript Identifier Solyc05g004000.1.1
  • Gene Type Coding gene
  • Location SL4.0ch05 : 12567-13730 : positive

Gene Family Information

  • ID HOM05D125362
  • #Genes/#Species 1 / 1(orphan gene)
  • Phylogenetic origin
  • ID ORTHO05D480558
  • #Genes/#Species 1 / 1(orphan gene)
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Solyc05g004000.1.1
  • gene_id Solyc05g004000

Descriptions

  • Description B3 domain-containing protein (AHRD V3.3 *** A0A2G3DAB0_CAPCH)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003677
IEA
InterProDNA binding
GO:0003700
IEA
InterProDNA-binding transcription factor activity

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR003340 B3 DNA binding domain
IPR015300 DNA-binding pseudobarrel domain superfamily
IPR044800 B3 domain-containing transcription factor LEC2-like
Mapman id Description
15.5.5.3 RNA biosynthesis.transcriptional regulation.B3 transcription factor superfamily.transcription factor (RAV/NGATHA)