Gene: Solyc04g082810.4
General Information
Structural Information
- Species Solanum lycopersicum
- Gene Identifier Solyc04g082810.4
- Transcript Identifier Solyc04g082810.4.1
- Gene Type Coding gene
- Location SL4.0ch04 : 64316654-64317619 : positive
Gene Family Information
- ID HOM05D000244
- #Genes/#Species 1727/95
- Phylogenetic origin
- ID ORTHO05D000179
- #Genes/#Species 1482/95
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid Solyc04g082810.4.1
- uniprot A0A3Q7GCS4
- gene_id Solyc04g082810
Descriptions
- Description AT-hook motif nuclear-localized protein (AHRD V3.3 *** A0A2G3CFM3_CAPCH)
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0045824 | ISO | PLAZA Integrative Orthology | negative regulation of innate immune response | AT1G20900 |
| GO:0006325 | ISO | PLAZA Integrative Orthology | chromatin organization | AT1G20900 |
| GO:0010150 | ISO | PLAZA Integrative Orthology | leaf senescence | AT1G20900 |
| GO:0009640 | ISO | PLAZA Integrative Orthology | photomorphogenesis | AT1G20900 |
| GO:0009938 | ISO | PLAZA Integrative Orthology | negative regulation of gibberellic acid mediated signaling pathway | AT4G35390 |
| GO:0010228 | IBA | GOA Database | vegetative to reproductive phase transition of meristem | |
| GO:0006355 | IEA | GOA Database | regulation of transcription, DNA-templated |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0043621 | ISO | PLAZA Integrative Orthology | protein self-association | AT4G35390 |
| GO:0003690 | ISO | PLAZA Integrative Orthology | double-stranded DNA binding | AT1G20900 |
| GO:0042393 | ISO | PLAZA Integrative Orthology | histone binding | AT1G20900 |
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT4G35390 |
| GO:0003680 | IBA IEA | GOA Database | minor groove of adenine-thymine-rich DNA binding | |
| GO:0003680 | IEA | InterPro | minor groove of adenine-thymine-rich DNA binding | |
| GO:0003700 | IBA IEA | GOA Database | DNA-binding transcription factor activity | |
| GO:0003677 | IEA | GOA Database | DNA binding |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005634 | IBA IEA | GOA Database | nucleus |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 15.5.8.1 | RNA biosynthesis.transcriptional regulation.AHL transcription factor superfamily.clade-A transcription factor (AHL) |