Gene: Solyc04g082400.3

General Information

Structural Information

  • Species Solanum lycopersicum
  • Gene Identifier Solyc04g082400.3
  • Transcript Identifier Solyc04g082400.3.1
  • Gene Type Coding gene
  • Location SL4.0ch04 : 64039854-64047184 : negative

Gene Family Information

  • ID HOM05D001348
  • #Genes/#Species 466/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Solyc04g082400.3.1
  • uniprot A0A3Q7GBV7
  • gene_id Solyc04g082400

Descriptions

  • Description 1,4-alpha-glucan-branching enzyme (AHRD V3.3 *** GLGB_SOLTU)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005982
ISO
PLAZA Integrative Orthologystarch metabolic process AT2G36390
GO:0071329
ISO
PLAZA Integrative Orthologycellular response to sucrose stimulus AT2G36390
GO:0071333
ISO
PLAZA Integrative Orthologycellular response to glucose stimulus AT2G36390
GO:0071332
ISO
PLAZA Integrative Orthologycellular response to fructose stimulus AT2G36390
GO:0010021
ISO
PLAZA Integrative Orthologyamylopectin biosynthetic process AT2G36390
GO:0071482
ISO
PLAZA Integrative Orthologycellular response to light stimulus AT2G36390
GO:0005975
IBA
IEA
GOA Databasecarbohydrate metabolic process
GO:0005975
IEA
InterProcarbohydrate metabolic process
GO:0005978
IEA
GOA Databaseglycogen biosynthetic process
GO:0005978
IEA
InterProglycogen biosynthetic process
GO:0019252
IEA
GOA Databasestarch biosynthetic process

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0004553
IEA
GOA Databasehydrolase activity, hydrolyzing O-glycosyl compounds
GO:0004553
IEA
InterProhydrolase activity, hydrolyzing O-glycosyl compounds
GO:0003844
IBA
IEA
GOA Database1,4-alpha-glucan branching enzyme activity
GO:0003844
IEA
InterPro1,4-alpha-glucan branching enzyme activity
GO:0043169
IEA
GOA Databasecation binding
GO:0043169
IEA
InterProcation binding
GO:0003824
IEA
GOA Databasecatalytic activity
GO:0003824
IEA
InterProcatalytic activity
GO:0016740
IEA
GOA Databasetransferase activity
GO:0102752
IEA
GOA Database1,4-alpha-glucan branching enzyme activity (using a glucosylated glycogenin as primer for glycogen synthesis)

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009507
ISO
PLAZA Integrative Orthologychloroplast AT2G36390
GO:0009570
ISO
PLAZA Integrative Orthologychloroplast stroma AT2G36390
GO:0005737
IBA
GOA Databasecytoplasm
GO:0009501
IEA
GOA Databaseamyloplast

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR004193 Glycoside hydrolase, family 13, N-terminal
IPR037439 1,4-alpha-glucan-branching enzyme
IPR014756 Immunoglobulin E-set
IPR006048 Alpha-amylase/branching enzyme, C-terminal all beta
IPR006047 Glycosyl hydrolase, family 13, catalytic domain
IPR013783 Immunoglobulin-like fold
IPR017853 Glycoside hydrolase superfamily
IPR013780 Glycosyl hydrolase, all-beta
Mapman id Description
3.2.2.5 Carbohydrate metabolism.starch metabolism.biosynthesis.starch branching enzyme