Gene: Solyc04g082030.1

General Information

Structural Information

  • Species Solanum lycopersicum
  • Gene Identifier Solyc04g082030.1
  • Transcript Identifier Solyc04g082030.1.1
  • Gene Type Coding gene
  • Location SL4.0ch04 : 63806163-63807458 : negative

Gene Family Information

  • ID HOM05D004078
  • #Genes/#Species 172/64
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Solyc04g082030.1.1
  • uniprot O22616
  • gene_id Solyc04g082030

Descriptions

  • Description ornithine decarboxylase
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0033387
IBA
IEA
GOA Databaseputrescine biosynthetic process from ornithine
GO:0033387
IDA
Gene Ontologyputrescine biosynthetic process from ornithine1
GO:0006596
IEA
GOA Databasepolyamine biosynthetic process
GO:0006596
IDA
Gene Ontologypolyamine biosynthetic process1
GO:0006596
IEA
InterPropolyamine biosynthetic process

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0042978
IDA
Gene Ontologyornithine decarboxylase activator activity1
GO:0003824
IEA
GOA Databasecatalytic activity
GO:0003824
IEA
InterProcatalytic activity
GO:0004586
IBA
IEA
GOA Databaseornithine decarboxylase activity
GO:0016831
IEA
GOA Databasecarboxy-lyase activity
GO:0016829
IEA
GOA Databaselyase activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005737
IBA
GOA Databasecytoplasm

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal
IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal
IPR002433 Ornithine decarboxylase
IPR009006 Alanine racemase/group IV decarboxylase, C-terminal
IPR029066 PLP-binding barrel
IPR000183 Ornithine/DAP/Arg decarboxylase
Mapman id Description
8.1.2.1 Polyamine metabolism.putrescine biosynthesis.cytosolic pathway.ornithine decarboxylase