Gene: Solyc04g080700.4

General Information

Structural Information

  • Species Solanum lycopersicum
  • Gene Identifier Solyc04g080700.4
  • Transcript Identifier Solyc04g080700.4.1
  • Gene Type Coding gene
  • Location SL4.0ch04 : 62765642-62768486 : negative

Gene Family Information

  • ID HOM05D002183
  • #Genes/#Species 307/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Solyc04g080700.4.1
  • uniprot A0A3Q7GBI0
  • gene_id Solyc04g080700

Descriptions

  • Description Bifunctional nuclease 2 (AHRD V3.3 *** A0A2G3AX92_CAPCH)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0090305
IEA
GOA Databasenucleic acid phosphodiester bond hydrolysis
GO:0016567
IBA
GOA Databaseprotein ubiquitination
GO:0045892
ISO
PLAZA Integrative Orthologynegative regulation of transcription, DNA-templated AT1G75380
GO:0031063
ISO
PLAZA Integrative Orthologyregulation of histone deacetylation AT1G75380
GO:0050832
ISO
PLAZA Integrative Orthologydefense response to fungus AT1G75380

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0004518
IEA
GOA Databasenuclease activity
GO:0004518
IEA
InterPronuclease activity
GO:0043565
ISO
PLAZA Integrative Orthologysequence-specific DNA binding AT1G75380

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0030891
IBA
GOA DatabaseVCB complex
GO:0005634
IBA
GOA Databasenucleus

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR036104 Bifunctional nuclease superfamily
IPR003729 Bifunctional nuclease domain
Mapman id Description
35.1 not assigned.annotated