Gene: Solyc04g078830.3
General Information
Structural Information
- Species Solanum lycopersicum
- Gene Identifier Solyc04g078830.3
- Transcript Identifier Solyc04g078830.3.1
- Gene Type Coding gene
- Location SL4.0ch04 : 61474397-61480868 : positive
Gene Family Information
- ID HOM05D004452
- #Genes/#Species 161/98
- Phylogenetic origin
- ID ORTHO05D005358
- #Genes/#Species 159/98
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid Solyc04g078830.3.1
- uniprot A0A3Q7H235
- gene_id Solyc04g078830
Descriptions
- Description THO complex subunit 5B (AHRD V3.3 *** A0A2G3CPZ0_CAPCH)
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0032786 | IBA | GOA Database | positive regulation of DNA-templated transcription, elongation | |
| GO:0006406 | IBA | GOA Database | mRNA export from nucleus |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003729 | IBA | GOA Database | mRNA binding |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005634 | IEA | GOA Database | nucleus | |
| GO:0000445 | IBA | GOA Database | THO complex part of transcription export complex | |
| GO:0000347 | ISO | PLAZA Integrative Orthology | THO complex | AT1G45233 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR019163 | THO complex, subunit 5 |
| Mapman id | Description |
|---|---|
| 16.10.1.1.4 | RNA processing.messenger ribonucleoparticle (mRNP) export.TREX/THO mRNP trafficking complex.THO subcomplex.component THOC5 |