Gene: Solyc04g076210.3

General Information

Structural Information

  • Species Solanum lycopersicum
  • Gene Identifier Solyc04g076210.3
  • Transcript Identifier Solyc04g076210.3.1
  • Gene Type Coding gene
  • Location SL4.0ch04 : 59138899-59147083 : positive

Gene Family Information

  • ID HOM05D000344
  • #Genes/#Species 1371/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Solyc04g076210.3.1
  • uniprot K4BU59
  • gene_id Solyc04g076210

Descriptions

  • Description Ubiquitin carboxyl-terminal hydrolase 16 (AHRD V3.3 *** A0A2G2ZQX4_CAPAN)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009908
IEA
GOA Databaseflower development
GO:0009651
IEA
GOA Databaseresponse to salt stress
GO:0051301
IEA
GOA Databasecell division
GO:0048367
IEA
GOA Databaseshoot system development
GO:0048366
IEA
GOA Databaseleaf development
GO:0048364
IEA
GOA Databaseroot development
GO:1901000
IEA
GOA Databaseregulation of response to salt stress
GO:0016579
IBA
IEA
GOA Databaseprotein deubiquitination
GO:0016579
IEA
InterProprotein deubiquitination
GO:0006511
IEA
GOA Databaseubiquitin-dependent protein catabolic process
GO:0006508
IEA
GOA Databaseproteolysis

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT4G24560
GO:0004843
IBA
IEA
GOA Databasethiol-dependent deubiquitinase
GO:0004843
IEA
InterProthiol-dependent deubiquitinase
GO:0004197
IBA
GOA Databasecysteine-type endopeptidase activity
GO:0008233
IEA
GOA Databasepeptidase activity
GO:0008234
IEA
GOA Databasecysteine-type peptidase activity
GO:0016787
IEA
GOA Databasehydrolase activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005829
IBA
GOA Databasecytosol
GO:0005634
IBA
GOA Databasenucleus

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR002893 Zinc finger, MYND-type
IPR001394 Peptidase C19, ubiquitin carboxyl-terminal hydrolase
IPR038765 Papain-like cysteine peptidase superfamily
Mapman id Description
19.2.3.1.1.6 Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein deconjugation.ubiquitin deconjugation.UBP deubiquitinase activities.deubiquitinase (UBP15-21)