Gene: Solyc04g071310.3

General Information

Structural Information

  • Species Solanum lycopersicum
  • Gene Identifier Solyc04g071310.3
  • Transcript Identifier Solyc04g071310.3.1
  • Gene Type Coding gene
  • Location SL4.0ch04 : 56046788-56056243 : positive

Gene Family Information

  • ID HOM05D005762
  • #Genes/#Species 135/96
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Solyc04g071310.3.1
  • uniprot A0A3Q7G7G9
  • gene_id Solyc04g071310

Descriptions

  • Description cyclin-dependent kinase-activating kinase assembly factor-related / CDK-activating kinase assembly factor-like protein (AHRD V3.3 *** AT4G30820.3)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006289
IEA
GOA Databasenucleotide-excision repair
GO:0006289
IEA
InterPronucleotide-excision repair
GO:0045737
IEA
GOA Databasepositive regulation of cyclin-dependent protein serine/threonine kinase activity
GO:0045737
IEA
InterPropositive regulation of cyclin-dependent protein serine/threonine kinase activity
GO:0006281
IBA
GOA DatabaseDNA repair
GO:0006357
IBA
GOA Databaseregulation of transcription by RNA polymerase II
GO:0000079
IBA
GOA Databaseregulation of cyclin-dependent protein serine/threonine kinase activity

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0061575
IEA
GOA Databasecyclin-dependent protein serine/threonine kinase activator activity
GO:0061575
IEA
InterProcyclin-dependent protein serine/threonine kinase activator activity
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT4G30820

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005675
IBA
IEA
GOA Databasetranscription factor TFIIH holo complex
GO:0005675
IEA
InterProtranscription factor TFIIH holo complex
GO:0005634
IEA
GOA Databasenucleus

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR015877 Cdk-activating kinase assembly factor MAT1, centre
IPR004575 Cdk-activating kinase assembly factor MAT1/Tfb3
Mapman id Description
14.6.3.1.1 DNA damage response.nucleotide excision repair (NER).multi-functional TFIIh complex.CAK kinase module.scaffolding subunit TFB3
15.3.3.5.2.3 RNA biosynthesis.RNA polymerase II-dependent transcription.transcription initiation.TFIIh basal transcription factor complex.CAK kinase module.scaffolding component TFB3