Gene: Solyc04g054890.3
General Information
Structural Information
- Species Solanum lycopersicum
- Gene Identifier Solyc04g054890.3
- Transcript Identifier Solyc04g054890.3.1
- Gene Type Coding gene
- Location SL4.0ch04 : 52656997-52661318 : negative
Gene Family Information
- ID HOM05D001068
- #Genes/#Species 573/100
- Phylogenetic origin
- ID ORTHO05D002190
- #Genes/#Species 309/97
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid Solyc04g054890.3.1
- uniprot A0A3Q7G2E7
- gene_id Solyc04g054890
Descriptions
- Description Acyl-coenzyme A oxidase (AHRD V3.3 *** A0A1U8F2S5_CAPAN)
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0001676 | ISO | PLAZA Integrative Orthology | long-chain fatty acid metabolic process | AT5G65110 |
| GO:0055088 | IBA | GOA Database | lipid homeostasis | |
| GO:0033540 | IBA IEA | GOA Database | fatty acid beta-oxidation using acyl-CoA oxidase | |
| GO:0033540 | IEA | InterPro | fatty acid beta-oxidation using acyl-CoA oxidase | |
| GO:0006635 | IEA | GOA Database | fatty acid beta-oxidation | |
| GO:0006635 | IEA | InterPro | fatty acid beta-oxidation | |
| GO:0006631 | IEA | GOA Database | fatty acid metabolic process | |
| GO:0006631 | IEA | InterPro | fatty acid metabolic process |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0016627 | IEA | GOA Database | oxidoreductase activity, acting on the CH-CH group of donors | |
| GO:0016627 | IEA | InterPro | oxidoreductase activity, acting on the CH-CH group of donors | |
| GO:0050660 | IBA | GOA Database | flavin adenine dinucleotide binding | |
| GO:0003997 | IBA IEA | GOA Database | acyl-CoA oxidase activity | |
| GO:0003997 | IEA | InterPro | acyl-CoA oxidase activity | |
| GO:0005504 | IBA IEA | GOA Database | fatty acid binding | |
| GO:0005504 | IEA | InterPro | fatty acid binding | |
| GO:0071949 | IEA | GOA Database | FAD binding | |
| GO:0071949 | IEA | InterPro | FAD binding |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005777 | IBA IEA | GOA Database | peroxisome | |
| GO:0005777 | IEA | InterPro | peroxisome |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR012258 | Acyl-CoA oxidase |
| IPR009100 | Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily |
| IPR034171 | Peroxisomal acyl-coenzyme A oxidase |
| IPR036250 | Acyl-CoA dehydrogenase-like, C-terminal |
| IPR006091 | Acyl-CoA oxidase/dehydrogenase, central domain |
| IPR009075 | Acyl-CoA dehydrogenase/oxidase C-terminal |
| IPR002655 | Acyl-CoA oxidase, C-terminal |
| Mapman id | Description |
|---|---|
| 5.7.3.2.1 | Lipid metabolism.lipid degradation.fatty acid degradation.core beta-oxidation.acyl CoA oxidase (ACX) |