Notice (8): Undefined variable: source_groups_information [APP/View/Tools/similarity_heatmap.ctp, line 77]Code Context <label>Source(s)</label> <select class='form form-select' name='ontology_source_group' id='ontology_source_group'> <?php foreach ($source_groups_information['available'] as $source_group_id) : ?> $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Tools/similarity_heatmap.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D001068', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '573', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'gene_selection' => array( 'parameters' => array( (int) 0 => array( [maximum depth reached] ) ), 'genes' => array( 'A01p20470' => 'bna', 'A03p19670' => 'bna', 'A06p31930' => 'bna', 'A09p08920' => 'bna', 'A10p05020' => 'bna', 'A10p05030' => 'bna', 'A10p05050' => 'bna', 'Aa31LG1G16860' => 'aar', 'Aa31LG1G7310' => 'aar', 'Aa31LG1G8290' => 'aar', 'Aa31LG1G8300' => 'aar', 'Aa31LG2G12940' => 'aar', 'Aa31LG9G12100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.114' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.999' => 'aag', 'Actinidia10988' => 'ach', 'Actinidia11120' => 'ach', 'Actinidia14405' => 'ach', 'Actinidia36601' => 'ach', 'Ah.01g003900' => 'amhyb', 'Ah.02g122190' => 'amhyb', 'Ah.07g198830' => 'amhyb', 'Ah.12g054350' => 'amhyb', 'AL1G16310' => 'aly', 'AL1G16320' => 'aly', 'AL4G31770' => 'aly', 'AL575U10010' => 'aly', 'AL7G37930' => 'aly', 'AL8G42610' => 'aly', 'Aqoxy1G02246_Aqoxy1G02247' => 'aox', 'Aqoxy3G02817' => 'aox', 'Aqoxy5G01973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.C7HVNL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9A8PV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JX5WJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWEA9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PINB5K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QXG3RX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDH47T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UDES1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZPM9RR' => 'arhy', 'AT1G06290' => 'ath', 'AT1G06310' => 'ath', 'AT2G35690' => 'ath', 'AT3G06690' => 'ath', 'AT4G16760' => 'ath', 'AT5G65110' => 'ath', 'ATR0057G009' => 'atr', 'ATR0564G071' => 'atr', 'ATR0602G078' => 'atr', 'Atru.chr4.128' => 'acertr', 'Atru.chr6.2845' => 'acertr', 'Atru.chr9.1272' => 'acertr', 'AUR62002026' => 'cqu', 'AUR62003772' => 'cqu', 'AUR62007112' => 'cqu', 'AUR62019981' => 'cqu', 'AUR62035386' => 'cqu', 'AUR62035387' => 'cqu', 'AUR62036084' => 'cqu', 'AUR62036085' => 'cqu', 'AUR62036086' => 'cqu', 'BcaB01g03886' => 'bca', 'BcaB02g06786' => 'bca', 'BcaB02g06788' => 'bca', 'BcaB02g06804' => 'bca', 'BcaB02g06806' => 'bca', 'BcaB02g06807' => 'bca', 'BcaB02g09862' => 'bca', 'BcaB04g20003' => 'bca', 'BcaC01g02740' => 'bca', 'BcaC01g05713' => 'bca', 'BcaC04g23270' => 'bca', 'BcaC05g24275' => 'bca', 'BcaC05g24277' => 'bca', 'BcaC05g24278' => 'bca', 'BcaC05g24280' => 'bca', 'BcaC05g24284' => 'bca', 'BcaC05g24285' => 'bca', 'BcaC05g24286' => 'bca', 'BcaC09g50411' => 'bca', 'BcaNung00152' => 'bca', 'BolC1t02524H' => 'bol', 'BolC3t14694H' => 'bol', 'BolC3t18364H' => 'bol', 'BolC5t29234H' => 'bol', 'BolC5t29235H' => 'bol', 'BolC5t29237H' => 'bol', 'BolC5t29403H' => 'bol', 'BolC6t35390H' => 'bol', 'BolC9t53936H' => 'bol', 'BraA01t01975Z' => 'bra', 'BraA03t11221Z' => 'bra', 'BraA06t26126Z' => 'bra', 'BraA09t36543Z' => 'bra', 'BraA10t42768Z' => 'bra', 'BraA10t42769Z' => 'bra', 'BraA10t42771Z' => 'bra', 'C01p25740' => 'bna', 'C03p22930' => 'bna', 'C03p61020' => 'bna', 'C05p04620' => 'bna', 'C05p04640' => 'bna', 'C09p10360' => 'bna', 'CAN.G1178.15' => 'can', 'CAN.G725.4' => 'can', 'CAN.G782.15' => 'can', 'CANSAT01G0317' => 'cansat', 'CANSAT21G1427' => 'cansat', 'CANSAT64G0075' => 'cansat', 'CARHR005870' => 'chi', 'CARHR129930' => 'chi', 'CARHR223330' => 'chi', 'CARHR279020' => 'chi', 'Carub.0001s0566' => 'cru', 'Carub.0001s0567' => 'cru', 'Carub.0004s1742' => 'cru', 'Carub.0007s2462' => 'cru', 'Carub.0008s2595' => 'cru', 'Ca_17724_v3' => 'car', 'Ca_18909_v3' => 'car', 'Ca_21988_v3' => 'car', 'Ca_21989_v3' => 'car', 'Ca_24593_v3' => 'car', 'Ca_30457_v3' => 'car', 'CBR_g12337' => 'cbr', 'CBR_g12338' => 'cbr', 'CBR_g30062' => 'cbr', 'Cc00_g26970' => 'ccan', 'Cc05_g07930' => 'ccan', 'Cc07_g15410' => 'ccan', 'Cc08_g12140' => 'ccan', 'CDE02G3830' => 'cde', 'CDE08G0847' => 'cde', 'CDE10G0713' => 'cde', 'CDE10G1075' => 'cde', 'Cfa002686' => 'cfa', 'Cfa012691' => 'cfa', 'Cfa014679' => 'cfa', 'Cfa021966' => 'cfa', 'Ciclev10014502m.g' => 'ccl', 'Ciclev10019196m.g' => 'ccl', 'Ciclev10025052m.g' => 'ccl', 'CiPaw.03G183200' => 'cil', 'CiPaw.04G097400' => 'cil', 'CiPaw.11G081900' => 'cil', 'CiPaw.12G050100' => 'cil', 'ClCG01G004240' => 'cla', 'ClCG02G010170' => 'cla', 'ClCG07G009580' => 'cla', 'COL.COLO4_03961' => 'col', 'COL.COLO4_04705' => 'col', 'COL.COLO4_04707' => 'col', 'COL.COLO4_09938' => 'col', 'COL.COLO4_37120' => 'col', 'Cpa.g.sc20.236' => 'cpa', 'Cpa.g.sc50.2' => 'cpa', 'Cpa.g.sc89.71' => 'cpa', 'Cre05.g232002' => 'cre', 'Cre11.g467350' => 'cre', 'Cre16.g687350' => 'cre', 'Cre16.g689050' => 'cre', 'CsaV3_2G034560' => 'csa', 'CsaV3_3G020890' => 'csa', 'CsaV3_4G004730' => 'csa', 'CsaV3_5G004440' => 'csa', 'CsaV3_UNG137080' => 'csa', 'CsaV3_UNG144110' => 'csa', 'CsaV3_UNG218460' => 'csa', 'CSS0000404' => 'camsi', 'CSS0004981' => 'camsi', 'CSS0009750' => 'camsi', 'CSS0023687' => 'camsi', 'CSS0035524' => 'camsi', 'CSS0037699' => 'camsi', 'CSS0049947' => 'camsi', 'DCAR_004991' => 'dca', 'DCAR_008508' => 'dca', 'DCAR_009762' => 'dca', 'DCAR_010695' => 'dca', 'DCAR_011507' => 'dca', 'DCAR_014237' => 'dca', 'DCAR_021268' => 'dca', 'DCAR_027762' => 'dca', 'DCAR_027764' => 'dca', 'DCAR_031638' => 'dca', 'Dinv02425' => 'din', 'Dinv19990' => 'din', 'Dinv21659' => 'din', 'Dinv21927' => 'din', 'Dinv39170' => 'din', 'Dinv39171' => 'din', 'Duzib052G0179' => 'dzi', 'Duzib068G1125' => 'dzi', 'Duzib084G1186' => 'dzi', 'Duzib187G0805' => 'dzi', 'Duzib205G0096' => 'dzi', 'Duzib248G0800' => 'dzi', 'Duzib264G0741' => 'dzi', 'ECA232G2874' => 'eca', 'ECA233G2258' => 'eca', 'ECA233G3500' => 'eca', 'ECA234G0082' => 'eca', 'ECA234G1381' => 'eca', 'ECA236G4578' => 'eca', 'EL10Ac5g12342' => 'bvu', 'EL10Ac6g15077' => 'bvu', 'EL10Ac9g20848' => 'bvu', 'Eucgr.E00406' => 'egr', 'Eucgr.H04812' => 'egr', 'Eucgr.K01080' => 'egr', 'Eucgr.L03435' => 'egr', 'FAN02G0755' => 'fan', 'FAN04G2918' => 'fan', 'FAN05G2079' => 'fan', 'FAN05G5054' => 'fan', 'FAN08G3629' => 'fan', 'FAN11G2862' => 'fan', 'FAN13G2133' => 'fan', 'FAN14G5608' => 'fan', 'FAN14G5876' => 'fan', 'FAN18G2254' => 'fan', 'FAN18G2390' => 'fan', 'FAN18G3422' => 'fan', 'FAN18G4353' => 'fan', 'FAN18G4470' => 'fan', 'FAN19G2166' => 'fan', 'FAN23G2514' => 'fan', 'FAN26G0488' => 'fan', 'FAN28G1509' => 'fan', 'FvH4_1g21250' => 'fve', 'FvH4_1g27611' => 'fve', 'FvH4_3g38301' => 'fve', 'FvH4_5g19470' => 'fve', 'FvH4_5g28500' => 'fve', 'FvH4_6g23261' => 'fve', 'FvH4_6g26900' => 'fve', 'Glyma.01G207500' => 'gma', 'Glyma.05G062200' => 'gma', 'Glyma.05G180100' => 'gma', 'Glyma.06G285400' => 'gma', 'Glyma.11G035200' => 'gma', 'Glyma.12G120300' => 'gma', 'Glyma.14G125300' => 'gma', 'Glyma.17G144000' => 'gma', 'Glyma.17G144051' => 'gma', 'Gohir.1Z049317' => 'ghi', 'Gohir.A01G019800' => 'ghi', 'Gohir.A01G019900' => 'ghi', 'Gohir.A03G153650' => 'ghi', 'Gohir.A09G196500' => 'ghi', 'Gohir.A10G085600' => 'ghi', 'Gohir.A11G027400' => 'ghi', 'Gohir.A11G200400' => 'ghi', 'Gohir.A12G139700' => 'ghi', 'Gohir.A12G215400' => 'ghi', 'Gohir.D01G018400' => 'ghi', 'Gohir.D01G018500' => 'ghi', 'Gohir.D02G176600' => 'ghi', 'Gohir.D05G284800' => 'ghi', 'Gohir.D09G191100' => 'ghi', 'Gohir.D10G100150' => 'ghi', 'Gohir.D10G102900' => 'ghi', 'Gohir.D11G026600' => 'ghi', 'Gohir.D11G223300' => 'ghi', 'Gohir.D12G144200' => 'ghi', 'Gohir.D12G218000' => 'ghi', 'Gorai.002G020600' => 'gra', 'Gorai.002G020700' => 'gra', 'Gorai.005G198300' => 'gra', 'Gorai.006G213900' => 'gra', 'Gorai.007G028900' => 'gra', 'Gorai.007G240800' => 'gra', 'Gorai.008G155500' => 'gra', 'Gorai.008G233600' => 'gra', 'Gorai.009G299600' => 'gra', 'Gorai.011G109800' => 'gra', 'Gorai.011G112800' => 'gra', 'GSVIVG01002259001' => 'vvi', 'GSVIVG01005812001' => 'vvi', 'GSVIVG01016325001' => 'vvi', 'GSVIVG01018579001' => 'vvi', 'GSVIVG01018581001' => 'vvi', 'GSVIVG01020650001' => 'vvi', 'GSVIVG01022584001' => 'vvi', 'GSVIVG01023773001' => 'vvi', 'HanXRQChr04g0099171' => 'han', 'HanXRQChr05g0148551' => 'han', 'HanXRQChr08g0227741' => 'han', 'HanXRQChr10g0306311' => 'han', 'HanXRQChr16g0501091' => 'han', 'HanXRQChr16g0505851' => 'han', 'HanXRQChr16g0526381' => 'han', 'HanXRQChr16g0526411' => 'han', 'HanXRQChr17g0565241' => 'han', 'HanXRQChr17g0565261' => 'han', 'Haze_07942' => 'cav', 'Haze_13278' => 'cav', 'Haze_24957' => 'cav', 'Hma1.2p1_0002F.1_g002410' => 'hma', 'Hma1.2p1_0308F.1_g120070' => 'hma', 'Hma1.2p1_0316F.1_g122820' => 'hma', 'Hma1.2p1_1136F.1_g260540' => 'hma', 'HPP92_009241' => 'vpl', 'HPP92_022429' => 'vpl', 'HPP92_027388' => 'vpl', 'Hund00993' => 'sun', 'Hund07850' => 'sun', 'Hund07851' => 'sun', 'Hund13639' => 'sun', 'Hund13640' => 'sun', 'Hund14578' => 'sun', 'Hund16270' => 'sun', 'Hund28547' => 'sun', 'Hund28548' => 'sun', 'Lalb_Chr03g0029731' => 'lal', 'Lalb_Chr05g0214321' => 'lal', 'Lalb_Chr05g0214331' => 'lal', 'Lalb_Chr05g0214351' => 'lal', 'Lalb_Chr05g0221141' => 'lal', 'Lalb_Chr07g0185081' => 'lal', 'Lalb_Chr07g0185091' => 'lal', 'Lalb_Chr09g0329981' => 'lal', 'Lalb_Chr12g0203721' => 'lal', 'Lalb_Chr16g0386611' => 'lal', 'Lj2g0000811' => 'lja', 'Lj3g0009326' => 'lja', 'Lj3g0024792' => 'lja', 'Lj4A885T21' => 'lonja', 'Lj4g0007078' => 'lja', 'Lj4g0020838' => 'lja', 'Lj8A106G57' => 'lonja', 'Lj8A269T38' => 'lonja', 'Lsat_1_v5_gn_1_21640' => 'lsa', 'Lsat_1_v5_gn_4_141661' => 'lsa', 'Lsat_1_v5_gn_4_28480' => 'lsa', 'Lsat_1_v5_gn_4_28500' => 'lsa', 'Lsat_1_v5_gn_4_28520' => 'lsa', 'Lsat_1_v5_gn_6_18061' => 'lsa', 'Manes.01G083700' => 'mes', 'Manes.02G041600' => 'mes', 'Manes.12G092800' => 'mes', 'Manes.12G137000' => 'mes', 'Mapoly0007s0119' => 'mpo', 'Mapoly0014s0189' => 'mpo', 'Mapoly0169s0009' => 'mpo', 'MBI05_g34471_MAGBIO' => 'mbi', 'MBI07_g06445_MAGBIO' => 'mbi', 'MCO09G755' => 'mco', 'MCO11G871' => 'mco', 'MCO15G066' => 'mco', 'MD01G1026400' => 'mdo', 'MD04G1060500' => 'mdo', 'MD09G1241300' => 'mdo', 'MD09G1241500' => 'mdo', 'MD13G1127300' => 'mdo', 'MD15G1327100' => 'mdo', 'MD17G1234100' => 'mdo', 'Medtr2g033680' => 'mtr', 'Medtr3g435700' => 'mtr', 'Medtr4g079290' => 'mtr', 'Medtr4g091440' => 'mtr', 'Medtr4g100640' => 'mtr', 'Medtr5g012920' => 'mtr', 'Medtr6g464330' => 'mtr', 'Medtr8g090375' => 'mtr', 'MELO3C005515.2' => 'cme', 'MELO3C017590.2' => 'cme', 'MELO3C019320.2' => 'cme', 'Migut.A01136' => 'egut', 'Migut.L00107' => 'egut', 'Migut.M00195' => 'egut', 'MSTRG.12124' => 'ama', 'MSTRG.15727' => 'ama', 'Nitab4.5_0000104g0310' => 'nta', 'Nitab4.5_0001381g0040' => 'nta', 'Nitab4.5_0002196g0050' => 'nta', 'Nitab4.5_0002289g0160' => 'nta', 'Nitab4.5_0003050g0030' => 'nta', 'Nitab4.5_0004120g0020' => 'nta', 'Nitab4.5_0005651g0020' => 'nta', 'Nitab4.5_0006065g0010' => 'nta', 'Nn1g04278' => 'nnu', 'Nn6g33873' => 'nnu', 'Oeu000573.1' => 'oeu', 'Oeu000574.1' => 'oeu', 'Oeu038268.1' => 'oeu', 'Oeu040705.1' => 'oeu', 'Oeu056589.1' => 'oeu', 'Oeu062951.1' => 'oeu', 'Oeu064840.1' => 'oeu', 'Os06g0103500' => 'osa', 'Os06g0354500' => 'osa', 'Os11g0605500' => 'osa', 'Peaxi162Scf00214g00048' => 'pax', 'Peaxi162Scf00241g01211' => 'pax', 'Peaxi162Scf00422g00413' => 'pax', 'PGR042G1327' => 'pgr', 'PGR102G0764' => 'pgr', 'PGR142G0739' => 'pgr', 'PGSC0003DMG400004827' => 'stu', 'PGSC0003DMG400004828' => 'stu', 'PGSC0003DMG400010548' => 'stu', 'PGSC0003DMG400020620' => 'stu', 'PGSC0003DMG400021853' => 'stu', 'Phvul.002G056700' => 'pvu', 'Phvul.002G254200' => 'pvu', 'Phvul.002G254300' => 'pvu', 'Phvul.003G222800' => 'pvu', 'Phvul.009G116400' => 'pvu', 'Phvul.011G116000' => 'pvu', 'Potri.001G155500' => 'ptr', 'Potri.003G079200' => 'ptr', 'Potri.005G077600' => 'ptr', 'Potri.007G090400' => 'ptr', 'Potri.013G123500' => 'ptr', 'Potri.019G092600' => 'ptr', 'Pp3c13_22370' => 'ppa', 'Pp3c14_14860' => 'ppa', 'Pp3c26_540' => 'ppa', 'Pp3c5_8300' => 'ppa', 'Pp3c6_21500' => 'ppa', 'PRCOL_00006639' => 'pco', 'Prupe.3G127000' => 'ppe', 'Prupe.5G065100' => 'ppe', 'Prupe.6G181800' => 'ppe', 'Prupe.7G067100' => 'ppe', 'Psat0s625g0080' => 'psa', 'Psat2g176520' => 'psa', 'Psat3g079840' => 'psa', 'Psat3g079880' => 'psa', 'Psat4g072960' => 'psa', 'Psat4g198800' => 'psa', 'Psat6g218600' => 'psa', 'Psat7g054120' => 'psa', 'Psat7g126880' => 'psa', 'Psat7g166960' => 'psa', 'Psat7g202040' => 'psa', 'PSO063G6720' => 'pso', 'PSO210G2154' => 'pso', 'PSO447G0282' => 'pso', 'PSO541G4864' => 'pso', 'PSO675G3167' => 'pso', 'PSO782G5462' => 'pso', 'QL06p049990' => 'qlo', 'QL12p011360' => 'qlo', 'RcHm_v2.0_Chr1g0336421' => 'rch', 'RcHm_v2.0_Chr2g0115091' => 'rch', 'RcHm_v2.0_Chr2g0128641' => 'rch', 'RcHm_v2.0_Chr2g0152681' => 'rch', 'RcHm_v2.0_Chr3g0481201' => 'rch', 'RcHm_v2.0_Chr3g0481221' => 'rch', 'RcHm_v2.0_Chr6g0266281' => 'rch', 'RcHm_v2.0_Chr6g0266301' => 'rch', 'RcHm_v2.0_Chr7g0204041' => 'rch', 'RcHm_v2.0_Chr7g0206361' => 'rch', 'RcHm_v2.0_Chr7g0226181' => 'rch', 'Rhsim06G0135500' => 'rsi', 'Rhsim10G0158600' => 'rsi', 'Rhsim10G0158900' => 'rsi', 'Rhsim11G0003700' => 'rsi', 'Sabra01G0125000' => 'sbr', 'Sabra01G0125200' => 'sbr', 'Sabra03G0049400' => 'sbr', 'Sabra05G0063900' => 'sbr', 'Sabra07G0074100' => 'sbr', 'Sabra13G0102500' => 'sbr', 'Sabra19G0105800' => 'sbr', 'SalBow5G0613' => 'sbo', 'SalBow5G1748' => 'sbo', 'SalBow6G3759' => 'sbo', 'SalBow7G1339' => 'sbo', 'Sc06g0009140' => 'sci', 'Sc16g0005550' => 'sci', 'Sc22g0001000' => 'sci', 'Sed0001164' => 'sed', 'Sed0007318' => 'sed', 'Sed0012317' => 'sed', 'Sed0014357' => 'sed', 'Sed0021431' => 'sed', 'Sed0023908' => 'sed', 'SEGI_01087' => 'sgi', 'SEGI_03845' => 'sgi', 'SEGI_04770' => 'sgi', 'SEGI_09162' => 'sgi', 'SEGI_12300' => 'sgi', 'SEGI_12780' => 'sgi', 'SEGI_20270' => 'sgi', 'SEGI_20994' => 'sgi', 'SEGI_21730' => 'sgi', 'SEGI_25110' => 'sgi', 'SEGI_29810' => 'sgi', 'SEGI_33260' => 'sgi', 'SEGI_35715' => 'sgi', 'SEGI_36182' => 'sgi', 'SGA_v2.0_scaffold199G41219' => 'sas', 'SGA_v2.0_scaffold258G45790' => 'sas', 'SGA_v2.0_scaffold47G17760' => 'sas', 'SHI09349' => 'shi', 'SHI09350' => 'shi', 'SHI09353' => 'shi', 'SHI09357' => 'shi', 'SMO200G0037' => 'smo', 'SMO266G0061' => 'smo', 'SMO358G0542' => 'smo', 'Solyc04g054890.3' => 'sly', 'Solyc08g078400.3' => 'sly', 'Solyc10g008110.4' => 'sly', 'Sopen04g024690' => 'spe', 'Sopen08g026880' => 'spe', 'Sopen08g026890' => 'spe', 'Sopen10g003980' => 'spe', 'Sp1g05100' => 'spa', 'Sp2g28190' => 'spa', 'Sp4g17950' => 'spa', 'Sp7g17360' => 'spa', 'TAR376G0212' => 'tar', 'TAR627G0187' => 'tar', 'TAR629G1427' => 'tar', 'THA.LOC104799116' => 'tha', 'THA.LOC104800850' => 'tha', 'THA.LOC104806669' => 'tha', 'THA.LOC104812770' => 'tha', 'THA.LOC104814467' => 'tha', 'THA.LOC104815504' => 'tha', 'Thecc.01G104500' => 'tca', 'Thecc.02G188700' => 'tca', 'Thecc.03G247900' => 'tca', 'Thhalv10003747m.g' => 'esa', 'Thhalv10006988m.g' => 'esa', 'Thhalv10009440m.g' => 'esa', 'Thhalv10016360m.g' => 'esa', 'Thhalv10024621m.g' => 'esa', 'TPR.G11115' => 'tpr', 'TPR.G11439' => 'tpr', 'TPR.G18112' => 'tpr', 'TPR.G18124' => 'tpr', 'TPR.G18139' => 'tpr', 'TPR.G20916' => 'tpr', 'TPR.G21239' => 'tpr', 'TPR.G22740' => 'tpr', 'TPR.G28902' => 'tpr', 'TPR.G34856' => 'tpr', 'TPR.G36072' => 'tpr', 'TPR.G37610' => 'tpr', 'TPR.G39553' => 'tpr', 'TPR.G984' => 'tpr', 'TWI15G0242' => 'twi', 'TWI59G1279' => 'twi', 'TWI74G1627' => 'twi', 'TWI81G0453' => 'twi', 'unitig_747.g21753' => 'ugi', 'unitig_8.g3019' => 'ugi', 'vmacro00007' => 'vma', 'vmacro12355' => 'vma', 'vmacro12356' => 'vma', 'vmacro12946' => 'vma', 'VMungo0251G0701' => 'vmu', 'VMungo0251G0971' => 'vmu', 'VMungo1127G1013' => 'vmu', 'VMungo1127G1511' => 'vmu', 'VMungo1127G1678' => 'vmu', 'VMungo1127G1906' => 'vmu', 'VMungo1215G1615' => 'vmu', 'Zm00001eb016980' => 'zma', 'Zm00001eb083480' => 'zma', 'Zm00001eb148110' => 'zma', 'Zm00001eb167230' => 'zma', 'Zm00001eb200160' => 'zma', 'Zm00001eb259720' => 'zma', 'Zm00001eb334170' => 'zma', 'Zm00001eb376020' => 'zma', 'Zm00001eb379490' => 'zma' ) ), 'data_type' => 'gene_family', 'gf_id' => 'HOM05D001068', 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D001068' ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'subfamily_family_types' => array( (int) 0 => 'ORTHOFAM' ), 'parental_family_types' => array( (int) 0 => 'HOMFAM' ), 'gene_family_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'allowed_data_types' => array( 'GO' => 'Gene Ontology', 'INTERPRO' => 'InterPro', 'GENE_FAMILY' => 'Gene Family' ) ) $sidebar_info = array( 'gf_id' => 'HOM05D001068', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '573', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $gene_selection = array( 'parameters' => array( (int) 0 => array( 'data_type' => 'GENE_FAMILY', 'data_value' => 'HOM05D001068' ) ), 'genes' => array( 'A01p20470' => 'bna', 'A03p19670' => 'bna', 'A06p31930' => 'bna', 'A09p08920' => 'bna', 'A10p05020' => 'bna', 'A10p05030' => 'bna', 'A10p05050' => 'bna', 'Aa31LG1G16860' => 'aar', 'Aa31LG1G7310' => 'aar', 'Aa31LG1G8290' => 'aar', 'Aa31LG1G8300' => 'aar', 'Aa31LG2G12940' => 'aar', 'Aa31LG9G12100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.114' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.999' => 'aag', 'Actinidia10988' => 'ach', 'Actinidia11120' => 'ach', 'Actinidia14405' => 'ach', 'Actinidia36601' => 'ach', 'Ah.01g003900' => 'amhyb', 'Ah.02g122190' => 'amhyb', 'Ah.07g198830' => 'amhyb', 'Ah.12g054350' => 'amhyb', 'AL1G16310' => 'aly', 'AL1G16320' => 'aly', 'AL4G31770' => 'aly', 'AL575U10010' => 'aly', 'AL7G37930' => 'aly', 'AL8G42610' => 'aly', 'Aqoxy1G02246_Aqoxy1G02247' => 'aox', 'Aqoxy3G02817' => 'aox', 'Aqoxy5G01973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.C7HVNL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9A8PV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JX5WJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWEA9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PINB5K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QXG3RX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDH47T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UDES1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZPM9RR' => 'arhy', 'AT1G06290' => 'ath', 'AT1G06310' => 'ath', 'AT2G35690' => 'ath', 'AT3G06690' => 'ath', 'AT4G16760' => 'ath', 'AT5G65110' => 'ath', 'ATR0057G009' => 'atr', 'ATR0564G071' => 'atr', 'ATR0602G078' => 'atr', 'Atru.chr4.128' => 'acertr', 'Atru.chr6.2845' => 'acertr', 'Atru.chr9.1272' => 'acertr', 'AUR62002026' => 'cqu', 'AUR62003772' => 'cqu', 'AUR62007112' => 'cqu', 'AUR62019981' => 'cqu', 'AUR62035386' => 'cqu', 'AUR62035387' => 'cqu', 'AUR62036084' => 'cqu', 'AUR62036085' => 'cqu', 'AUR62036086' => 'cqu', 'BcaB01g03886' => 'bca', 'BcaB02g06786' => 'bca', 'BcaB02g06788' => 'bca', 'BcaB02g06804' => 'bca', 'BcaB02g06806' => 'bca', 'BcaB02g06807' => 'bca', 'BcaB02g09862' => 'bca', 'BcaB04g20003' => 'bca', 'BcaC01g02740' => 'bca', 'BcaC01g05713' => 'bca', 'BcaC04g23270' => 'bca', 'BcaC05g24275' => 'bca', 'BcaC05g24277' => 'bca', 'BcaC05g24278' => 'bca', 'BcaC05g24280' => 'bca', 'BcaC05g24284' => 'bca', 'BcaC05g24285' => 'bca', 'BcaC05g24286' => 'bca', 'BcaC09g50411' => 'bca', 'BcaNung00152' => 'bca', 'BolC1t02524H' => 'bol', 'BolC3t14694H' => 'bol', 'BolC3t18364H' => 'bol', 'BolC5t29234H' => 'bol', 'BolC5t29235H' => 'bol', 'BolC5t29237H' => 'bol', 'BolC5t29403H' => 'bol', 'BolC6t35390H' => 'bol', 'BolC9t53936H' => 'bol', 'BraA01t01975Z' => 'bra', 'BraA03t11221Z' => 'bra', 'BraA06t26126Z' => 'bra', 'BraA09t36543Z' => 'bra', 'BraA10t42768Z' => 'bra', 'BraA10t42769Z' => 'bra', 'BraA10t42771Z' => 'bra', 'C01p25740' => 'bna', 'C03p22930' => 'bna', 'C03p61020' => 'bna', 'C05p04620' => 'bna', 'C05p04640' => 'bna', 'C09p10360' => 'bna', 'CAN.G1178.15' => 'can', 'CAN.G725.4' => 'can', 'CAN.G782.15' => 'can', 'CANSAT01G0317' => 'cansat', 'CANSAT21G1427' => 'cansat', 'CANSAT64G0075' => 'cansat', 'CARHR005870' => 'chi', 'CARHR129930' => 'chi', 'CARHR223330' => 'chi', 'CARHR279020' => 'chi', 'Carub.0001s0566' => 'cru', 'Carub.0001s0567' => 'cru', 'Carub.0004s1742' => 'cru', 'Carub.0007s2462' => 'cru', 'Carub.0008s2595' => 'cru', 'Ca_17724_v3' => 'car', 'Ca_18909_v3' => 'car', 'Ca_21988_v3' => 'car', 'Ca_21989_v3' => 'car', 'Ca_24593_v3' => 'car', 'Ca_30457_v3' => 'car', 'CBR_g12337' => 'cbr', 'CBR_g12338' => 'cbr', 'CBR_g30062' => 'cbr', 'Cc00_g26970' => 'ccan', 'Cc05_g07930' => 'ccan', 'Cc07_g15410' => 'ccan', 'Cc08_g12140' => 'ccan', 'CDE02G3830' => 'cde', 'CDE08G0847' => 'cde', 'CDE10G0713' => 'cde', 'CDE10G1075' => 'cde', 'Cfa002686' => 'cfa', 'Cfa012691' => 'cfa', 'Cfa014679' => 'cfa', 'Cfa021966' => 'cfa', 'Ciclev10014502m.g' => 'ccl', 'Ciclev10019196m.g' => 'ccl', 'Ciclev10025052m.g' => 'ccl', 'CiPaw.03G183200' => 'cil', 'CiPaw.04G097400' => 'cil', 'CiPaw.11G081900' => 'cil', 'CiPaw.12G050100' => 'cil', 'ClCG01G004240' => 'cla', 'ClCG02G010170' => 'cla', 'ClCG07G009580' => 'cla', 'COL.COLO4_03961' => 'col', 'COL.COLO4_04705' => 'col', 'COL.COLO4_04707' => 'col', 'COL.COLO4_09938' => 'col', 'COL.COLO4_37120' => 'col', 'Cpa.g.sc20.236' => 'cpa', 'Cpa.g.sc50.2' => 'cpa', 'Cpa.g.sc89.71' => 'cpa', 'Cre05.g232002' => 'cre', 'Cre11.g467350' => 'cre', 'Cre16.g687350' => 'cre', 'Cre16.g689050' => 'cre', 'CsaV3_2G034560' => 'csa', 'CsaV3_3G020890' => 'csa', 'CsaV3_4G004730' => 'csa', 'CsaV3_5G004440' => 'csa', 'CsaV3_UNG137080' => 'csa', 'CsaV3_UNG144110' => 'csa', 'CsaV3_UNG218460' => 'csa', 'CSS0000404' => 'camsi', 'CSS0004981' => 'camsi', 'CSS0009750' => 'camsi', 'CSS0023687' => 'camsi', 'CSS0035524' => 'camsi', 'CSS0037699' => 'camsi', 'CSS0049947' => 'camsi', 'DCAR_004991' => 'dca', 'DCAR_008508' => 'dca', 'DCAR_009762' => 'dca', 'DCAR_010695' => 'dca', 'DCAR_011507' => 'dca', 'DCAR_014237' => 'dca', 'DCAR_021268' => 'dca', 'DCAR_027762' => 'dca', 'DCAR_027764' => 'dca', 'DCAR_031638' => 'dca', 'Dinv02425' => 'din', 'Dinv19990' => 'din', 'Dinv21659' => 'din', 'Dinv21927' => 'din', 'Dinv39170' => 'din', 'Dinv39171' => 'din', 'Duzib052G0179' => 'dzi', 'Duzib068G1125' => 'dzi', 'Duzib084G1186' => 'dzi', 'Duzib187G0805' => 'dzi', 'Duzib205G0096' => 'dzi', 'Duzib248G0800' => 'dzi', 'Duzib264G0741' => 'dzi', 'ECA232G2874' => 'eca', 'ECA233G2258' => 'eca', 'ECA233G3500' => 'eca', 'ECA234G0082' => 'eca', 'ECA234G1381' => 'eca', 'ECA236G4578' => 'eca', 'EL10Ac5g12342' => 'bvu', 'EL10Ac6g15077' => 'bvu', 'EL10Ac9g20848' => 'bvu', 'Eucgr.E00406' => 'egr', 'Eucgr.H04812' => 'egr', 'Eucgr.K01080' => 'egr', 'Eucgr.L03435' => 'egr', 'FAN02G0755' => 'fan', 'FAN04G2918' => 'fan', 'FAN05G2079' => 'fan', 'FAN05G5054' => 'fan', 'FAN08G3629' => 'fan', 'FAN11G2862' => 'fan', 'FAN13G2133' => 'fan', 'FAN14G5608' => 'fan', 'FAN14G5876' => 'fan', 'FAN18G2254' => 'fan', 'FAN18G2390' => 'fan', 'FAN18G3422' => 'fan', 'FAN18G4353' => 'fan', 'FAN18G4470' => 'fan', 'FAN19G2166' => 'fan', 'FAN23G2514' => 'fan', 'FAN26G0488' => 'fan', 'FAN28G1509' => 'fan', 'FvH4_1g21250' => 'fve', 'FvH4_1g27611' => 'fve', 'FvH4_3g38301' => 'fve', 'FvH4_5g19470' => 'fve', 'FvH4_5g28500' => 'fve', 'FvH4_6g23261' => 'fve', 'FvH4_6g26900' => 'fve', 'Glyma.01G207500' => 'gma', 'Glyma.05G062200' => 'gma', 'Glyma.05G180100' => 'gma', 'Glyma.06G285400' => 'gma', 'Glyma.11G035200' => 'gma', 'Glyma.12G120300' => 'gma', 'Glyma.14G125300' => 'gma', 'Glyma.17G144000' => 'gma', 'Glyma.17G144051' => 'gma', 'Gohir.1Z049317' => 'ghi', 'Gohir.A01G019800' => 'ghi', 'Gohir.A01G019900' => 'ghi', 'Gohir.A03G153650' => 'ghi', 'Gohir.A09G196500' => 'ghi', 'Gohir.A10G085600' => 'ghi', 'Gohir.A11G027400' => 'ghi', 'Gohir.A11G200400' => 'ghi', 'Gohir.A12G139700' => 'ghi', 'Gohir.A12G215400' => 'ghi', 'Gohir.D01G018400' => 'ghi', 'Gohir.D01G018500' => 'ghi', 'Gohir.D02G176600' => 'ghi', 'Gohir.D05G284800' => 'ghi', 'Gohir.D09G191100' => 'ghi', 'Gohir.D10G100150' => 'ghi', 'Gohir.D10G102900' => 'ghi', 'Gohir.D11G026600' => 'ghi', 'Gohir.D11G223300' => 'ghi', 'Gohir.D12G144200' => 'ghi', 'Gohir.D12G218000' => 'ghi', 'Gorai.002G020600' => 'gra', 'Gorai.002G020700' => 'gra', 'Gorai.005G198300' => 'gra', 'Gorai.006G213900' => 'gra', 'Gorai.007G028900' => 'gra', 'Gorai.007G240800' => 'gra', 'Gorai.008G155500' => 'gra', 'Gorai.008G233600' => 'gra', 'Gorai.009G299600' => 'gra', 'Gorai.011G109800' => 'gra', 'Gorai.011G112800' => 'gra', 'GSVIVG01002259001' => 'vvi', 'GSVIVG01005812001' => 'vvi', 'GSVIVG01016325001' => 'vvi', 'GSVIVG01018579001' => 'vvi', 'GSVIVG01018581001' => 'vvi', 'GSVIVG01020650001' => 'vvi', 'GSVIVG01022584001' => 'vvi', 'GSVIVG01023773001' => 'vvi', 'HanXRQChr04g0099171' => 'han', 'HanXRQChr05g0148551' => 'han', 'HanXRQChr08g0227741' => 'han', 'HanXRQChr10g0306311' => 'han', 'HanXRQChr16g0501091' => 'han', 'HanXRQChr16g0505851' => 'han', 'HanXRQChr16g0526381' => 'han', 'HanXRQChr16g0526411' => 'han', 'HanXRQChr17g0565241' => 'han', 'HanXRQChr17g0565261' => 'han', 'Haze_07942' => 'cav', 'Haze_13278' => 'cav', 'Haze_24957' => 'cav', 'Hma1.2p1_0002F.1_g002410' => 'hma', 'Hma1.2p1_0308F.1_g120070' => 'hma', 'Hma1.2p1_0316F.1_g122820' => 'hma', 'Hma1.2p1_1136F.1_g260540' => 'hma', 'HPP92_009241' => 'vpl', 'HPP92_022429' => 'vpl', 'HPP92_027388' => 'vpl', 'Hund00993' => 'sun', 'Hund07850' => 'sun', 'Hund07851' => 'sun', 'Hund13639' => 'sun', 'Hund13640' => 'sun', 'Hund14578' => 'sun', 'Hund16270' => 'sun', 'Hund28547' => 'sun', 'Hund28548' => 'sun', 'Lalb_Chr03g0029731' => 'lal', 'Lalb_Chr05g0214321' => 'lal', 'Lalb_Chr05g0214331' => 'lal', 'Lalb_Chr05g0214351' => 'lal', 'Lalb_Chr05g0221141' => 'lal', 'Lalb_Chr07g0185081' => 'lal', 'Lalb_Chr07g0185091' => 'lal', 'Lalb_Chr09g0329981' => 'lal', 'Lalb_Chr12g0203721' => 'lal', 'Lalb_Chr16g0386611' => 'lal', 'Lj2g0000811' => 'lja', 'Lj3g0009326' => 'lja', 'Lj3g0024792' => 'lja', 'Lj4A885T21' => 'lonja', 'Lj4g0007078' => 'lja', 'Lj4g0020838' => 'lja', 'Lj8A106G57' => 'lonja', 'Lj8A269T38' => 'lonja', 'Lsat_1_v5_gn_1_21640' => 'lsa', 'Lsat_1_v5_gn_4_141661' => 'lsa', 'Lsat_1_v5_gn_4_28480' => 'lsa', 'Lsat_1_v5_gn_4_28500' => 'lsa', 'Lsat_1_v5_gn_4_28520' => 'lsa', 'Lsat_1_v5_gn_6_18061' => 'lsa', 'Manes.01G083700' => 'mes', 'Manes.02G041600' => 'mes', 'Manes.12G092800' => 'mes', 'Manes.12G137000' => 'mes', 'Mapoly0007s0119' => 'mpo', 'Mapoly0014s0189' => 'mpo', 'Mapoly0169s0009' => 'mpo', 'MBI05_g34471_MAGBIO' => 'mbi', 'MBI07_g06445_MAGBIO' => 'mbi', 'MCO09G755' => 'mco', 'MCO11G871' => 'mco', 'MCO15G066' => 'mco', 'MD01G1026400' => 'mdo', 'MD04G1060500' => 'mdo', 'MD09G1241300' => 'mdo', 'MD09G1241500' => 'mdo', 'MD13G1127300' => 'mdo', 'MD15G1327100' => 'mdo', 'MD17G1234100' => 'mdo', 'Medtr2g033680' => 'mtr', 'Medtr3g435700' => 'mtr', 'Medtr4g079290' => 'mtr', 'Medtr4g091440' => 'mtr', 'Medtr4g100640' => 'mtr', 'Medtr5g012920' => 'mtr', 'Medtr6g464330' => 'mtr', 'Medtr8g090375' => 'mtr', 'MELO3C005515.2' => 'cme', 'MELO3C017590.2' => 'cme', 'MELO3C019320.2' => 'cme', 'Migut.A01136' => 'egut', 'Migut.L00107' => 'egut', 'Migut.M00195' => 'egut', 'MSTRG.12124' => 'ama', 'MSTRG.15727' => 'ama', 'Nitab4.5_0000104g0310' => 'nta', 'Nitab4.5_0001381g0040' => 'nta', 'Nitab4.5_0002196g0050' => 'nta', 'Nitab4.5_0002289g0160' => 'nta', 'Nitab4.5_0003050g0030' => 'nta', 'Nitab4.5_0004120g0020' => 'nta', 'Nitab4.5_0005651g0020' => 'nta', 'Nitab4.5_0006065g0010' => 'nta', 'Nn1g04278' => 'nnu', 'Nn6g33873' => 'nnu', 'Oeu000573.1' => 'oeu', 'Oeu000574.1' => 'oeu', 'Oeu038268.1' => 'oeu', 'Oeu040705.1' => 'oeu', 'Oeu056589.1' => 'oeu', 'Oeu062951.1' => 'oeu', 'Oeu064840.1' => 'oeu', 'Os06g0103500' => 'osa', 'Os06g0354500' => 'osa', 'Os11g0605500' => 'osa', 'Peaxi162Scf00214g00048' => 'pax', 'Peaxi162Scf00241g01211' => 'pax', 'Peaxi162Scf00422g00413' => 'pax', 'PGR042G1327' => 'pgr', 'PGR102G0764' => 'pgr', 'PGR142G0739' => 'pgr', 'PGSC0003DMG400004827' => 'stu', 'PGSC0003DMG400004828' => 'stu', 'PGSC0003DMG400010548' => 'stu', 'PGSC0003DMG400020620' => 'stu', 'PGSC0003DMG400021853' => 'stu', 'Phvul.002G056700' => 'pvu', 'Phvul.002G254200' => 'pvu', 'Phvul.002G254300' => 'pvu', 'Phvul.003G222800' => 'pvu', 'Phvul.009G116400' => 'pvu', 'Phvul.011G116000' => 'pvu', 'Potri.001G155500' => 'ptr', 'Potri.003G079200' => 'ptr', 'Potri.005G077600' => 'ptr', 'Potri.007G090400' => 'ptr', 'Potri.013G123500' => 'ptr', 'Potri.019G092600' => 'ptr', 'Pp3c13_22370' => 'ppa', 'Pp3c14_14860' => 'ppa', 'Pp3c26_540' => 'ppa', 'Pp3c5_8300' => 'ppa', 'Pp3c6_21500' => 'ppa', 'PRCOL_00006639' => 'pco', 'Prupe.3G127000' => 'ppe', 'Prupe.5G065100' => 'ppe', 'Prupe.6G181800' => 'ppe', 'Prupe.7G067100' => 'ppe', 'Psat0s625g0080' => 'psa', 'Psat2g176520' => 'psa', 'Psat3g079840' => 'psa', 'Psat3g079880' => 'psa', 'Psat4g072960' => 'psa', 'Psat4g198800' => 'psa', 'Psat6g218600' => 'psa', 'Psat7g054120' => 'psa', 'Psat7g126880' => 'psa', 'Psat7g166960' => 'psa', 'Psat7g202040' => 'psa', 'PSO063G6720' => 'pso', 'PSO210G2154' => 'pso', 'PSO447G0282' => 'pso', 'PSO541G4864' => 'pso', 'PSO675G3167' => 'pso', 'PSO782G5462' => 'pso', 'QL06p049990' => 'qlo', 'QL12p011360' => 'qlo', 'RcHm_v2.0_Chr1g0336421' => 'rch', 'RcHm_v2.0_Chr2g0115091' => 'rch', 'RcHm_v2.0_Chr2g0128641' => 'rch', 'RcHm_v2.0_Chr2g0152681' => 'rch', 'RcHm_v2.0_Chr3g0481201' => 'rch', 'RcHm_v2.0_Chr3g0481221' => 'rch', 'RcHm_v2.0_Chr6g0266281' => 'rch', 'RcHm_v2.0_Chr6g0266301' => 'rch', 'RcHm_v2.0_Chr7g0204041' => 'rch', 'RcHm_v2.0_Chr7g0206361' => 'rch', 'RcHm_v2.0_Chr7g0226181' => 'rch', 'Rhsim06G0135500' => 'rsi', 'Rhsim10G0158600' => 'rsi', 'Rhsim10G0158900' => 'rsi', 'Rhsim11G0003700' => 'rsi', 'Sabra01G0125000' => 'sbr', 'Sabra01G0125200' => 'sbr', 'Sabra03G0049400' => 'sbr', 'Sabra05G0063900' => 'sbr', 'Sabra07G0074100' => 'sbr', 'Sabra13G0102500' => 'sbr', 'Sabra19G0105800' => 'sbr', 'SalBow5G0613' => 'sbo', 'SalBow5G1748' => 'sbo', 'SalBow6G3759' => 'sbo', 'SalBow7G1339' => 'sbo', 'Sc06g0009140' => 'sci', 'Sc16g0005550' => 'sci', 'Sc22g0001000' => 'sci', 'Sed0001164' => 'sed', 'Sed0007318' => 'sed', 'Sed0012317' => 'sed', 'Sed0014357' => 'sed', 'Sed0021431' => 'sed', 'Sed0023908' => 'sed', 'SEGI_01087' => 'sgi', 'SEGI_03845' => 'sgi', 'SEGI_04770' => 'sgi', 'SEGI_09162' => 'sgi', 'SEGI_12300' => 'sgi', 'SEGI_12780' => 'sgi', 'SEGI_20270' => 'sgi', 'SEGI_20994' => 'sgi', 'SEGI_21730' => 'sgi', 'SEGI_25110' => 'sgi', 'SEGI_29810' => 'sgi', 'SEGI_33260' => 'sgi', 'SEGI_35715' => 'sgi', 'SEGI_36182' => 'sgi', 'SGA_v2.0_scaffold199G41219' => 'sas', 'SGA_v2.0_scaffold258G45790' => 'sas', 'SGA_v2.0_scaffold47G17760' => 'sas', 'SHI09349' => 'shi', 'SHI09350' => 'shi', 'SHI09353' => 'shi', 'SHI09357' => 'shi', 'SMO200G0037' => 'smo', 'SMO266G0061' => 'smo', 'SMO358G0542' => 'smo', 'Solyc04g054890.3' => 'sly', 'Solyc08g078400.3' => 'sly', 'Solyc10g008110.4' => 'sly', 'Sopen04g024690' => 'spe', 'Sopen08g026880' => 'spe', 'Sopen08g026890' => 'spe', 'Sopen10g003980' => 'spe', 'Sp1g05100' => 'spa', 'Sp2g28190' => 'spa', 'Sp4g17950' => 'spa', 'Sp7g17360' => 'spa', 'TAR376G0212' => 'tar', 'TAR627G0187' => 'tar', 'TAR629G1427' => 'tar', 'THA.LOC104799116' => 'tha', 'THA.LOC104800850' => 'tha', 'THA.LOC104806669' => 'tha', 'THA.LOC104812770' => 'tha', 'THA.LOC104814467' => 'tha', 'THA.LOC104815504' => 'tha', 'Thecc.01G104500' => 'tca', 'Thecc.02G188700' => 'tca', 'Thecc.03G247900' => 'tca', 'Thhalv10003747m.g' => 'esa', 'Thhalv10006988m.g' => 'esa', 'Thhalv10009440m.g' => 'esa', 'Thhalv10016360m.g' => 'esa', 'Thhalv10024621m.g' => 'esa', 'TPR.G11115' => 'tpr', 'TPR.G11439' => 'tpr', 'TPR.G18112' => 'tpr', 'TPR.G18124' => 'tpr', 'TPR.G18139' => 'tpr', 'TPR.G20916' => 'tpr', 'TPR.G21239' => 'tpr', 'TPR.G22740' => 'tpr', 'TPR.G28902' => 'tpr', 'TPR.G34856' => 'tpr', 'TPR.G36072' => 'tpr', 'TPR.G37610' => 'tpr', 'TPR.G39553' => 'tpr', 'TPR.G984' => 'tpr', 'TWI15G0242' => 'twi', 'TWI59G1279' => 'twi', 'TWI74G1627' => 'twi', 'TWI81G0453' => 'twi', 'unitig_747.g21753' => 'ugi', 'unitig_8.g3019' => 'ugi', 'vmacro00007' => 'vma', 'vmacro12355' => 'vma', 'vmacro12356' => 'vma', 'vmacro12946' => 'vma', 'VMungo0251G0701' => 'vmu', 'VMungo0251G0971' => 'vmu', 'VMungo1127G1013' => 'vmu', 'VMungo1127G1511' => 'vmu', 'VMungo1127G1678' => 'vmu', 'VMungo1127G1906' => 'vmu', 'VMungo1215G1615' => 'vmu', 'Zm00001eb016980' => 'zma', 'Zm00001eb083480' => 'zma', 'Zm00001eb148110' => 'zma', 'Zm00001eb167230' => 'zma', 'Zm00001eb200160' => 'zma', 'Zm00001eb259720' => 'zma', 'Zm00001eb334170' => 'zma', 'Zm00001eb376020' => 'zma', 'Zm00001eb379490' => 'zma' ) ) $data_type = 'gene_family' $gf_id = 'HOM05D001068' $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D001068' ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $subfamily_family_types = array( (int) 0 => 'ORTHOFAM' ) $parental_family_types = array( (int) 0 => 'HOMFAM' ) $gene_family_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $allowed_data_types = array( 'GO' => 'Gene Ontology', 'INTERPRO' => 'InterPro', 'GENE_FAMILY' => 'Gene Family' ) $data_identifier_value = 'HOM05D001068' $data_identifier_description = '' $adt_title = 'Gene Family' $adt = 'GENE_FAMILY' $is_selected = 'selected='selected'' $parameter = array( 'data_type' => 'GENE_FAMILY', 'data_value' => 'HOM05D001068' )include - APP/View/Tools/similarity_heatmap.ctp, line 77 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::render() - CORE/Cake/View/View.php, line 473 Controller::render() - CORE/Cake/Controller/Controller.php, line 963 Dispatcher::_invoke() - CORE/Cake/Routing/Dispatcher.php, line 200 Dispatcher::dispatch() - CORE/Cake/Routing/Dispatcher.php, line 167 [main] - APP/webroot/index.php, line 151
<label>Source(s)</label> <select class='form form-select' name='ontology_source_group' id='ontology_source_group'> <?php foreach ($source_groups_information['available'] as $source_group_id) : ?>
<label>Source(s)</label>
<select class='form form-select' name='ontology_source_group' id='ontology_source_group'>
<?php foreach ($source_groups_information['available'] as $source_group_id) : ?>
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Tools/similarity_heatmap.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D001068', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '573', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'gene_selection' => array( 'parameters' => array( (int) 0 => array( [maximum depth reached] ) ), 'genes' => array( 'A01p20470' => 'bna', 'A03p19670' => 'bna', 'A06p31930' => 'bna', 'A09p08920' => 'bna', 'A10p05020' => 'bna', 'A10p05030' => 'bna', 'A10p05050' => 'bna', 'Aa31LG1G16860' => 'aar', 'Aa31LG1G7310' => 'aar', 'Aa31LG1G8290' => 'aar', 'Aa31LG1G8300' => 'aar', 'Aa31LG2G12940' => 'aar', 'Aa31LG9G12100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.114' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.999' => 'aag', 'Actinidia10988' => 'ach', 'Actinidia11120' => 'ach', 'Actinidia14405' => 'ach', 'Actinidia36601' => 'ach', 'Ah.01g003900' => 'amhyb', 'Ah.02g122190' => 'amhyb', 'Ah.07g198830' => 'amhyb', 'Ah.12g054350' => 'amhyb', 'AL1G16310' => 'aly', 'AL1G16320' => 'aly', 'AL4G31770' => 'aly', 'AL575U10010' => 'aly', 'AL7G37930' => 'aly', 'AL8G42610' => 'aly', 'Aqoxy1G02246_Aqoxy1G02247' => 'aox', 'Aqoxy3G02817' => 'aox', 'Aqoxy5G01973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.C7HVNL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9A8PV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JX5WJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWEA9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PINB5K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QXG3RX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDH47T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UDES1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZPM9RR' => 'arhy', 'AT1G06290' => 'ath', 'AT1G06310' => 'ath', 'AT2G35690' => 'ath', 'AT3G06690' => 'ath', 'AT4G16760' => 'ath', 'AT5G65110' => 'ath', 'ATR0057G009' => 'atr', 'ATR0564G071' => 'atr', 'ATR0602G078' => 'atr', 'Atru.chr4.128' => 'acertr', 'Atru.chr6.2845' => 'acertr', 'Atru.chr9.1272' => 'acertr', 'AUR62002026' => 'cqu', 'AUR62003772' => 'cqu', 'AUR62007112' => 'cqu', 'AUR62019981' => 'cqu', 'AUR62035386' => 'cqu', 'AUR62035387' => 'cqu', 'AUR62036084' => 'cqu', 'AUR62036085' => 'cqu', 'AUR62036086' => 'cqu', 'BcaB01g03886' => 'bca', 'BcaB02g06786' => 'bca', 'BcaB02g06788' => 'bca', 'BcaB02g06804' => 'bca', 'BcaB02g06806' => 'bca', 'BcaB02g06807' => 'bca', 'BcaB02g09862' => 'bca', 'BcaB04g20003' => 'bca', 'BcaC01g02740' => 'bca', 'BcaC01g05713' => 'bca', 'BcaC04g23270' => 'bca', 'BcaC05g24275' => 'bca', 'BcaC05g24277' => 'bca', 'BcaC05g24278' => 'bca', 'BcaC05g24280' => 'bca', 'BcaC05g24284' => 'bca', 'BcaC05g24285' => 'bca', 'BcaC05g24286' => 'bca', 'BcaC09g50411' => 'bca', 'BcaNung00152' => 'bca', 'BolC1t02524H' => 'bol', 'BolC3t14694H' => 'bol', 'BolC3t18364H' => 'bol', 'BolC5t29234H' => 'bol', 'BolC5t29235H' => 'bol', 'BolC5t29237H' => 'bol', 'BolC5t29403H' => 'bol', 'BolC6t35390H' => 'bol', 'BolC9t53936H' => 'bol', 'BraA01t01975Z' => 'bra', 'BraA03t11221Z' => 'bra', 'BraA06t26126Z' => 'bra', 'BraA09t36543Z' => 'bra', 'BraA10t42768Z' => 'bra', 'BraA10t42769Z' => 'bra', 'BraA10t42771Z' => 'bra', 'C01p25740' => 'bna', 'C03p22930' => 'bna', 'C03p61020' => 'bna', 'C05p04620' => 'bna', 'C05p04640' => 'bna', 'C09p10360' => 'bna', 'CAN.G1178.15' => 'can', 'CAN.G725.4' => 'can', 'CAN.G782.15' => 'can', 'CANSAT01G0317' => 'cansat', 'CANSAT21G1427' => 'cansat', 'CANSAT64G0075' => 'cansat', 'CARHR005870' => 'chi', 'CARHR129930' => 'chi', 'CARHR223330' => 'chi', 'CARHR279020' => 'chi', 'Carub.0001s0566' => 'cru', 'Carub.0001s0567' => 'cru', 'Carub.0004s1742' => 'cru', 'Carub.0007s2462' => 'cru', 'Carub.0008s2595' => 'cru', 'Ca_17724_v3' => 'car', 'Ca_18909_v3' => 'car', 'Ca_21988_v3' => 'car', 'Ca_21989_v3' => 'car', 'Ca_24593_v3' => 'car', 'Ca_30457_v3' => 'car', 'CBR_g12337' => 'cbr', 'CBR_g12338' => 'cbr', 'CBR_g30062' => 'cbr', 'Cc00_g26970' => 'ccan', 'Cc05_g07930' => 'ccan', 'Cc07_g15410' => 'ccan', 'Cc08_g12140' => 'ccan', 'CDE02G3830' => 'cde', 'CDE08G0847' => 'cde', 'CDE10G0713' => 'cde', 'CDE10G1075' => 'cde', 'Cfa002686' => 'cfa', 'Cfa012691' => 'cfa', 'Cfa014679' => 'cfa', 'Cfa021966' => 'cfa', 'Ciclev10014502m.g' => 'ccl', 'Ciclev10019196m.g' => 'ccl', 'Ciclev10025052m.g' => 'ccl', 'CiPaw.03G183200' => 'cil', 'CiPaw.04G097400' => 'cil', 'CiPaw.11G081900' => 'cil', 'CiPaw.12G050100' => 'cil', 'ClCG01G004240' => 'cla', 'ClCG02G010170' => 'cla', 'ClCG07G009580' => 'cla', 'COL.COLO4_03961' => 'col', 'COL.COLO4_04705' => 'col', 'COL.COLO4_04707' => 'col', 'COL.COLO4_09938' => 'col', 'COL.COLO4_37120' => 'col', 'Cpa.g.sc20.236' => 'cpa', 'Cpa.g.sc50.2' => 'cpa', 'Cpa.g.sc89.71' => 'cpa', 'Cre05.g232002' => 'cre', 'Cre11.g467350' => 'cre', 'Cre16.g687350' => 'cre', 'Cre16.g689050' => 'cre', 'CsaV3_2G034560' => 'csa', 'CsaV3_3G020890' => 'csa', 'CsaV3_4G004730' => 'csa', 'CsaV3_5G004440' => 'csa', 'CsaV3_UNG137080' => 'csa', 'CsaV3_UNG144110' => 'csa', 'CsaV3_UNG218460' => 'csa', 'CSS0000404' => 'camsi', 'CSS0004981' => 'camsi', 'CSS0009750' => 'camsi', 'CSS0023687' => 'camsi', 'CSS0035524' => 'camsi', 'CSS0037699' => 'camsi', 'CSS0049947' => 'camsi', 'DCAR_004991' => 'dca', 'DCAR_008508' => 'dca', 'DCAR_009762' => 'dca', 'DCAR_010695' => 'dca', 'DCAR_011507' => 'dca', 'DCAR_014237' => 'dca', 'DCAR_021268' => 'dca', 'DCAR_027762' => 'dca', 'DCAR_027764' => 'dca', 'DCAR_031638' => 'dca', 'Dinv02425' => 'din', 'Dinv19990' => 'din', 'Dinv21659' => 'din', 'Dinv21927' => 'din', 'Dinv39170' => 'din', 'Dinv39171' => 'din', 'Duzib052G0179' => 'dzi', 'Duzib068G1125' => 'dzi', 'Duzib084G1186' => 'dzi', 'Duzib187G0805' => 'dzi', 'Duzib205G0096' => 'dzi', 'Duzib248G0800' => 'dzi', 'Duzib264G0741' => 'dzi', 'ECA232G2874' => 'eca', 'ECA233G2258' => 'eca', 'ECA233G3500' => 'eca', 'ECA234G0082' => 'eca', 'ECA234G1381' => 'eca', 'ECA236G4578' => 'eca', 'EL10Ac5g12342' => 'bvu', 'EL10Ac6g15077' => 'bvu', 'EL10Ac9g20848' => 'bvu', 'Eucgr.E00406' => 'egr', 'Eucgr.H04812' => 'egr', 'Eucgr.K01080' => 'egr', 'Eucgr.L03435' => 'egr', 'FAN02G0755' => 'fan', 'FAN04G2918' => 'fan', 'FAN05G2079' => 'fan', 'FAN05G5054' => 'fan', 'FAN08G3629' => 'fan', 'FAN11G2862' => 'fan', 'FAN13G2133' => 'fan', 'FAN14G5608' => 'fan', 'FAN14G5876' => 'fan', 'FAN18G2254' => 'fan', 'FAN18G2390' => 'fan', 'FAN18G3422' => 'fan', 'FAN18G4353' => 'fan', 'FAN18G4470' => 'fan', 'FAN19G2166' => 'fan', 'FAN23G2514' => 'fan', 'FAN26G0488' => 'fan', 'FAN28G1509' => 'fan', 'FvH4_1g21250' => 'fve', 'FvH4_1g27611' => 'fve', 'FvH4_3g38301' => 'fve', 'FvH4_5g19470' => 'fve', 'FvH4_5g28500' => 'fve', 'FvH4_6g23261' => 'fve', 'FvH4_6g26900' => 'fve', 'Glyma.01G207500' => 'gma', 'Glyma.05G062200' => 'gma', 'Glyma.05G180100' => 'gma', 'Glyma.06G285400' => 'gma', 'Glyma.11G035200' => 'gma', 'Glyma.12G120300' => 'gma', 'Glyma.14G125300' => 'gma', 'Glyma.17G144000' => 'gma', 'Glyma.17G144051' => 'gma', 'Gohir.1Z049317' => 'ghi', 'Gohir.A01G019800' => 'ghi', 'Gohir.A01G019900' => 'ghi', 'Gohir.A03G153650' => 'ghi', 'Gohir.A09G196500' => 'ghi', 'Gohir.A10G085600' => 'ghi', 'Gohir.A11G027400' => 'ghi', 'Gohir.A11G200400' => 'ghi', 'Gohir.A12G139700' => 'ghi', 'Gohir.A12G215400' => 'ghi', 'Gohir.D01G018400' => 'ghi', 'Gohir.D01G018500' => 'ghi', 'Gohir.D02G176600' => 'ghi', 'Gohir.D05G284800' => 'ghi', 'Gohir.D09G191100' => 'ghi', 'Gohir.D10G100150' => 'ghi', 'Gohir.D10G102900' => 'ghi', 'Gohir.D11G026600' => 'ghi', 'Gohir.D11G223300' => 'ghi', 'Gohir.D12G144200' => 'ghi', 'Gohir.D12G218000' => 'ghi', 'Gorai.002G020600' => 'gra', 'Gorai.002G020700' => 'gra', 'Gorai.005G198300' => 'gra', 'Gorai.006G213900' => 'gra', 'Gorai.007G028900' => 'gra', 'Gorai.007G240800' => 'gra', 'Gorai.008G155500' => 'gra', 'Gorai.008G233600' => 'gra', 'Gorai.009G299600' => 'gra', 'Gorai.011G109800' => 'gra', 'Gorai.011G112800' => 'gra', 'GSVIVG01002259001' => 'vvi', 'GSVIVG01005812001' => 'vvi', 'GSVIVG01016325001' => 'vvi', 'GSVIVG01018579001' => 'vvi', 'GSVIVG01018581001' => 'vvi', 'GSVIVG01020650001' => 'vvi', 'GSVIVG01022584001' => 'vvi', 'GSVIVG01023773001' => 'vvi', 'HanXRQChr04g0099171' => 'han', 'HanXRQChr05g0148551' => 'han', 'HanXRQChr08g0227741' => 'han', 'HanXRQChr10g0306311' => 'han', 'HanXRQChr16g0501091' => 'han', 'HanXRQChr16g0505851' => 'han', 'HanXRQChr16g0526381' => 'han', 'HanXRQChr16g0526411' => 'han', 'HanXRQChr17g0565241' => 'han', 'HanXRQChr17g0565261' => 'han', 'Haze_07942' => 'cav', 'Haze_13278' => 'cav', 'Haze_24957' => 'cav', 'Hma1.2p1_0002F.1_g002410' => 'hma', 'Hma1.2p1_0308F.1_g120070' => 'hma', 'Hma1.2p1_0316F.1_g122820' => 'hma', 'Hma1.2p1_1136F.1_g260540' => 'hma', 'HPP92_009241' => 'vpl', 'HPP92_022429' => 'vpl', 'HPP92_027388' => 'vpl', 'Hund00993' => 'sun', 'Hund07850' => 'sun', 'Hund07851' => 'sun', 'Hund13639' => 'sun', 'Hund13640' => 'sun', 'Hund14578' => 'sun', 'Hund16270' => 'sun', 'Hund28547' => 'sun', 'Hund28548' => 'sun', 'Lalb_Chr03g0029731' => 'lal', 'Lalb_Chr05g0214321' => 'lal', 'Lalb_Chr05g0214331' => 'lal', 'Lalb_Chr05g0214351' => 'lal', 'Lalb_Chr05g0221141' => 'lal', 'Lalb_Chr07g0185081' => 'lal', 'Lalb_Chr07g0185091' => 'lal', 'Lalb_Chr09g0329981' => 'lal', 'Lalb_Chr12g0203721' => 'lal', 'Lalb_Chr16g0386611' => 'lal', 'Lj2g0000811' => 'lja', 'Lj3g0009326' => 'lja', 'Lj3g0024792' => 'lja', 'Lj4A885T21' => 'lonja', 'Lj4g0007078' => 'lja', 'Lj4g0020838' => 'lja', 'Lj8A106G57' => 'lonja', 'Lj8A269T38' => 'lonja', 'Lsat_1_v5_gn_1_21640' => 'lsa', 'Lsat_1_v5_gn_4_141661' => 'lsa', 'Lsat_1_v5_gn_4_28480' => 'lsa', 'Lsat_1_v5_gn_4_28500' => 'lsa', 'Lsat_1_v5_gn_4_28520' => 'lsa', 'Lsat_1_v5_gn_6_18061' => 'lsa', 'Manes.01G083700' => 'mes', 'Manes.02G041600' => 'mes', 'Manes.12G092800' => 'mes', 'Manes.12G137000' => 'mes', 'Mapoly0007s0119' => 'mpo', 'Mapoly0014s0189' => 'mpo', 'Mapoly0169s0009' => 'mpo', 'MBI05_g34471_MAGBIO' => 'mbi', 'MBI07_g06445_MAGBIO' => 'mbi', 'MCO09G755' => 'mco', 'MCO11G871' => 'mco', 'MCO15G066' => 'mco', 'MD01G1026400' => 'mdo', 'MD04G1060500' => 'mdo', 'MD09G1241300' => 'mdo', 'MD09G1241500' => 'mdo', 'MD13G1127300' => 'mdo', 'MD15G1327100' => 'mdo', 'MD17G1234100' => 'mdo', 'Medtr2g033680' => 'mtr', 'Medtr3g435700' => 'mtr', 'Medtr4g079290' => 'mtr', 'Medtr4g091440' => 'mtr', 'Medtr4g100640' => 'mtr', 'Medtr5g012920' => 'mtr', 'Medtr6g464330' => 'mtr', 'Medtr8g090375' => 'mtr', 'MELO3C005515.2' => 'cme', 'MELO3C017590.2' => 'cme', 'MELO3C019320.2' => 'cme', 'Migut.A01136' => 'egut', 'Migut.L00107' => 'egut', 'Migut.M00195' => 'egut', 'MSTRG.12124' => 'ama', 'MSTRG.15727' => 'ama', 'Nitab4.5_0000104g0310' => 'nta', 'Nitab4.5_0001381g0040' => 'nta', 'Nitab4.5_0002196g0050' => 'nta', 'Nitab4.5_0002289g0160' => 'nta', 'Nitab4.5_0003050g0030' => 'nta', 'Nitab4.5_0004120g0020' => 'nta', 'Nitab4.5_0005651g0020' => 'nta', 'Nitab4.5_0006065g0010' => 'nta', 'Nn1g04278' => 'nnu', 'Nn6g33873' => 'nnu', 'Oeu000573.1' => 'oeu', 'Oeu000574.1' => 'oeu', 'Oeu038268.1' => 'oeu', 'Oeu040705.1' => 'oeu', 'Oeu056589.1' => 'oeu', 'Oeu062951.1' => 'oeu', 'Oeu064840.1' => 'oeu', 'Os06g0103500' => 'osa', 'Os06g0354500' => 'osa', 'Os11g0605500' => 'osa', 'Peaxi162Scf00214g00048' => 'pax', 'Peaxi162Scf00241g01211' => 'pax', 'Peaxi162Scf00422g00413' => 'pax', 'PGR042G1327' => 'pgr', 'PGR102G0764' => 'pgr', 'PGR142G0739' => 'pgr', 'PGSC0003DMG400004827' => 'stu', 'PGSC0003DMG400004828' => 'stu', 'PGSC0003DMG400010548' => 'stu', 'PGSC0003DMG400020620' => 'stu', 'PGSC0003DMG400021853' => 'stu', 'Phvul.002G056700' => 'pvu', 'Phvul.002G254200' => 'pvu', 'Phvul.002G254300' => 'pvu', 'Phvul.003G222800' => 'pvu', 'Phvul.009G116400' => 'pvu', 'Phvul.011G116000' => 'pvu', 'Potri.001G155500' => 'ptr', 'Potri.003G079200' => 'ptr', 'Potri.005G077600' => 'ptr', 'Potri.007G090400' => 'ptr', 'Potri.013G123500' => 'ptr', 'Potri.019G092600' => 'ptr', 'Pp3c13_22370' => 'ppa', 'Pp3c14_14860' => 'ppa', 'Pp3c26_540' => 'ppa', 'Pp3c5_8300' => 'ppa', 'Pp3c6_21500' => 'ppa', 'PRCOL_00006639' => 'pco', 'Prupe.3G127000' => 'ppe', 'Prupe.5G065100' => 'ppe', 'Prupe.6G181800' => 'ppe', 'Prupe.7G067100' => 'ppe', 'Psat0s625g0080' => 'psa', 'Psat2g176520' => 'psa', 'Psat3g079840' => 'psa', 'Psat3g079880' => 'psa', 'Psat4g072960' => 'psa', 'Psat4g198800' => 'psa', 'Psat6g218600' => 'psa', 'Psat7g054120' => 'psa', 'Psat7g126880' => 'psa', 'Psat7g166960' => 'psa', 'Psat7g202040' => 'psa', 'PSO063G6720' => 'pso', 'PSO210G2154' => 'pso', 'PSO447G0282' => 'pso', 'PSO541G4864' => 'pso', 'PSO675G3167' => 'pso', 'PSO782G5462' => 'pso', 'QL06p049990' => 'qlo', 'QL12p011360' => 'qlo', 'RcHm_v2.0_Chr1g0336421' => 'rch', 'RcHm_v2.0_Chr2g0115091' => 'rch', 'RcHm_v2.0_Chr2g0128641' => 'rch', 'RcHm_v2.0_Chr2g0152681' => 'rch', 'RcHm_v2.0_Chr3g0481201' => 'rch', 'RcHm_v2.0_Chr3g0481221' => 'rch', 'RcHm_v2.0_Chr6g0266281' => 'rch', 'RcHm_v2.0_Chr6g0266301' => 'rch', 'RcHm_v2.0_Chr7g0204041' => 'rch', 'RcHm_v2.0_Chr7g0206361' => 'rch', 'RcHm_v2.0_Chr7g0226181' => 'rch', 'Rhsim06G0135500' => 'rsi', 'Rhsim10G0158600' => 'rsi', 'Rhsim10G0158900' => 'rsi', 'Rhsim11G0003700' => 'rsi', 'Sabra01G0125000' => 'sbr', 'Sabra01G0125200' => 'sbr', 'Sabra03G0049400' => 'sbr', 'Sabra05G0063900' => 'sbr', 'Sabra07G0074100' => 'sbr', 'Sabra13G0102500' => 'sbr', 'Sabra19G0105800' => 'sbr', 'SalBow5G0613' => 'sbo', 'SalBow5G1748' => 'sbo', 'SalBow6G3759' => 'sbo', 'SalBow7G1339' => 'sbo', 'Sc06g0009140' => 'sci', 'Sc16g0005550' => 'sci', 'Sc22g0001000' => 'sci', 'Sed0001164' => 'sed', 'Sed0007318' => 'sed', 'Sed0012317' => 'sed', 'Sed0014357' => 'sed', 'Sed0021431' => 'sed', 'Sed0023908' => 'sed', 'SEGI_01087' => 'sgi', 'SEGI_03845' => 'sgi', 'SEGI_04770' => 'sgi', 'SEGI_09162' => 'sgi', 'SEGI_12300' => 'sgi', 'SEGI_12780' => 'sgi', 'SEGI_20270' => 'sgi', 'SEGI_20994' => 'sgi', 'SEGI_21730' => 'sgi', 'SEGI_25110' => 'sgi', 'SEGI_29810' => 'sgi', 'SEGI_33260' => 'sgi', 'SEGI_35715' => 'sgi', 'SEGI_36182' => 'sgi', 'SGA_v2.0_scaffold199G41219' => 'sas', 'SGA_v2.0_scaffold258G45790' => 'sas', 'SGA_v2.0_scaffold47G17760' => 'sas', 'SHI09349' => 'shi', 'SHI09350' => 'shi', 'SHI09353' => 'shi', 'SHI09357' => 'shi', 'SMO200G0037' => 'smo', 'SMO266G0061' => 'smo', 'SMO358G0542' => 'smo', 'Solyc04g054890.3' => 'sly', 'Solyc08g078400.3' => 'sly', 'Solyc10g008110.4' => 'sly', 'Sopen04g024690' => 'spe', 'Sopen08g026880' => 'spe', 'Sopen08g026890' => 'spe', 'Sopen10g003980' => 'spe', 'Sp1g05100' => 'spa', 'Sp2g28190' => 'spa', 'Sp4g17950' => 'spa', 'Sp7g17360' => 'spa', 'TAR376G0212' => 'tar', 'TAR627G0187' => 'tar', 'TAR629G1427' => 'tar', 'THA.LOC104799116' => 'tha', 'THA.LOC104800850' => 'tha', 'THA.LOC104806669' => 'tha', 'THA.LOC104812770' => 'tha', 'THA.LOC104814467' => 'tha', 'THA.LOC104815504' => 'tha', 'Thecc.01G104500' => 'tca', 'Thecc.02G188700' => 'tca', 'Thecc.03G247900' => 'tca', 'Thhalv10003747m.g' => 'esa', 'Thhalv10006988m.g' => 'esa', 'Thhalv10009440m.g' => 'esa', 'Thhalv10016360m.g' => 'esa', 'Thhalv10024621m.g' => 'esa', 'TPR.G11115' => 'tpr', 'TPR.G11439' => 'tpr', 'TPR.G18112' => 'tpr', 'TPR.G18124' => 'tpr', 'TPR.G18139' => 'tpr', 'TPR.G20916' => 'tpr', 'TPR.G21239' => 'tpr', 'TPR.G22740' => 'tpr', 'TPR.G28902' => 'tpr', 'TPR.G34856' => 'tpr', 'TPR.G36072' => 'tpr', 'TPR.G37610' => 'tpr', 'TPR.G39553' => 'tpr', 'TPR.G984' => 'tpr', 'TWI15G0242' => 'twi', 'TWI59G1279' => 'twi', 'TWI74G1627' => 'twi', 'TWI81G0453' => 'twi', 'unitig_747.g21753' => 'ugi', 'unitig_8.g3019' => 'ugi', 'vmacro00007' => 'vma', 'vmacro12355' => 'vma', 'vmacro12356' => 'vma', 'vmacro12946' => 'vma', 'VMungo0251G0701' => 'vmu', 'VMungo0251G0971' => 'vmu', 'VMungo1127G1013' => 'vmu', 'VMungo1127G1511' => 'vmu', 'VMungo1127G1678' => 'vmu', 'VMungo1127G1906' => 'vmu', 'VMungo1215G1615' => 'vmu', 'Zm00001eb016980' => 'zma', 'Zm00001eb083480' => 'zma', 'Zm00001eb148110' => 'zma', 'Zm00001eb167230' => 'zma', 'Zm00001eb200160' => 'zma', 'Zm00001eb259720' => 'zma', 'Zm00001eb334170' => 'zma', 'Zm00001eb376020' => 'zma', 'Zm00001eb379490' => 'zma' ) ), 'data_type' => 'gene_family', 'gf_id' => 'HOM05D001068', 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D001068' ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'subfamily_family_types' => array( (int) 0 => 'ORTHOFAM' ), 'parental_family_types' => array( (int) 0 => 'HOMFAM' ), 'gene_family_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'allowed_data_types' => array( 'GO' => 'Gene Ontology', 'INTERPRO' => 'InterPro', 'GENE_FAMILY' => 'Gene Family' ) ) $sidebar_info = array( 'gf_id' => 'HOM05D001068', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '573', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $gene_selection = array( 'parameters' => array( (int) 0 => array( 'data_type' => 'GENE_FAMILY', 'data_value' => 'HOM05D001068' ) ), 'genes' => array( 'A01p20470' => 'bna', 'A03p19670' => 'bna', 'A06p31930' => 'bna', 'A09p08920' => 'bna', 'A10p05020' => 'bna', 'A10p05030' => 'bna', 'A10p05050' => 'bna', 'Aa31LG1G16860' => 'aar', 'Aa31LG1G7310' => 'aar', 'Aa31LG1G8290' => 'aar', 'Aa31LG1G8300' => 'aar', 'Aa31LG2G12940' => 'aar', 'Aa31LG9G12100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.114' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.999' => 'aag', 'Actinidia10988' => 'ach', 'Actinidia11120' => 'ach', 'Actinidia14405' => 'ach', 'Actinidia36601' => 'ach', 'Ah.01g003900' => 'amhyb', 'Ah.02g122190' => 'amhyb', 'Ah.07g198830' => 'amhyb', 'Ah.12g054350' => 'amhyb', 'AL1G16310' => 'aly', 'AL1G16320' => 'aly', 'AL4G31770' => 'aly', 'AL575U10010' => 'aly', 'AL7G37930' => 'aly', 'AL8G42610' => 'aly', 'Aqoxy1G02246_Aqoxy1G02247' => 'aox', 'Aqoxy3G02817' => 'aox', 'Aqoxy5G01973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.C7HVNL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9A8PV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JX5WJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWEA9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PINB5K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QXG3RX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDH47T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UDES1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZPM9RR' => 'arhy', 'AT1G06290' => 'ath', 'AT1G06310' => 'ath', 'AT2G35690' => 'ath', 'AT3G06690' => 'ath', 'AT4G16760' => 'ath', 'AT5G65110' => 'ath', 'ATR0057G009' => 'atr', 'ATR0564G071' => 'atr', 'ATR0602G078' => 'atr', 'Atru.chr4.128' => 'acertr', 'Atru.chr6.2845' => 'acertr', 'Atru.chr9.1272' => 'acertr', 'AUR62002026' => 'cqu', 'AUR62003772' => 'cqu', 'AUR62007112' => 'cqu', 'AUR62019981' => 'cqu', 'AUR62035386' => 'cqu', 'AUR62035387' => 'cqu', 'AUR62036084' => 'cqu', 'AUR62036085' => 'cqu', 'AUR62036086' => 'cqu', 'BcaB01g03886' => 'bca', 'BcaB02g06786' => 'bca', 'BcaB02g06788' => 'bca', 'BcaB02g06804' => 'bca', 'BcaB02g06806' => 'bca', 'BcaB02g06807' => 'bca', 'BcaB02g09862' => 'bca', 'BcaB04g20003' => 'bca', 'BcaC01g02740' => 'bca', 'BcaC01g05713' => 'bca', 'BcaC04g23270' => 'bca', 'BcaC05g24275' => 'bca', 'BcaC05g24277' => 'bca', 'BcaC05g24278' => 'bca', 'BcaC05g24280' => 'bca', 'BcaC05g24284' => 'bca', 'BcaC05g24285' => 'bca', 'BcaC05g24286' => 'bca', 'BcaC09g50411' => 'bca', 'BcaNung00152' => 'bca', 'BolC1t02524H' => 'bol', 'BolC3t14694H' => 'bol', 'BolC3t18364H' => 'bol', 'BolC5t29234H' => 'bol', 'BolC5t29235H' => 'bol', 'BolC5t29237H' => 'bol', 'BolC5t29403H' => 'bol', 'BolC6t35390H' => 'bol', 'BolC9t53936H' => 'bol', 'BraA01t01975Z' => 'bra', 'BraA03t11221Z' => 'bra', 'BraA06t26126Z' => 'bra', 'BraA09t36543Z' => 'bra', 'BraA10t42768Z' => 'bra', 'BraA10t42769Z' => 'bra', 'BraA10t42771Z' => 'bra', 'C01p25740' => 'bna', 'C03p22930' => 'bna', 'C03p61020' => 'bna', 'C05p04620' => 'bna', 'C05p04640' => 'bna', 'C09p10360' => 'bna', 'CAN.G1178.15' => 'can', 'CAN.G725.4' => 'can', 'CAN.G782.15' => 'can', 'CANSAT01G0317' => 'cansat', 'CANSAT21G1427' => 'cansat', 'CANSAT64G0075' => 'cansat', 'CARHR005870' => 'chi', 'CARHR129930' => 'chi', 'CARHR223330' => 'chi', 'CARHR279020' => 'chi', 'Carub.0001s0566' => 'cru', 'Carub.0001s0567' => 'cru', 'Carub.0004s1742' => 'cru', 'Carub.0007s2462' => 'cru', 'Carub.0008s2595' => 'cru', 'Ca_17724_v3' => 'car', 'Ca_18909_v3' => 'car', 'Ca_21988_v3' => 'car', 'Ca_21989_v3' => 'car', 'Ca_24593_v3' => 'car', 'Ca_30457_v3' => 'car', 'CBR_g12337' => 'cbr', 'CBR_g12338' => 'cbr', 'CBR_g30062' => 'cbr', 'Cc00_g26970' => 'ccan', 'Cc05_g07930' => 'ccan', 'Cc07_g15410' => 'ccan', 'Cc08_g12140' => 'ccan', 'CDE02G3830' => 'cde', 'CDE08G0847' => 'cde', 'CDE10G0713' => 'cde', 'CDE10G1075' => 'cde', 'Cfa002686' => 'cfa', 'Cfa012691' => 'cfa', 'Cfa014679' => 'cfa', 'Cfa021966' => 'cfa', 'Ciclev10014502m.g' => 'ccl', 'Ciclev10019196m.g' => 'ccl', 'Ciclev10025052m.g' => 'ccl', 'CiPaw.03G183200' => 'cil', 'CiPaw.04G097400' => 'cil', 'CiPaw.11G081900' => 'cil', 'CiPaw.12G050100' => 'cil', 'ClCG01G004240' => 'cla', 'ClCG02G010170' => 'cla', 'ClCG07G009580' => 'cla', 'COL.COLO4_03961' => 'col', 'COL.COLO4_04705' => 'col', 'COL.COLO4_04707' => 'col', 'COL.COLO4_09938' => 'col', 'COL.COLO4_37120' => 'col', 'Cpa.g.sc20.236' => 'cpa', 'Cpa.g.sc50.2' => 'cpa', 'Cpa.g.sc89.71' => 'cpa', 'Cre05.g232002' => 'cre', 'Cre11.g467350' => 'cre', 'Cre16.g687350' => 'cre', 'Cre16.g689050' => 'cre', 'CsaV3_2G034560' => 'csa', 'CsaV3_3G020890' => 'csa', 'CsaV3_4G004730' => 'csa', 'CsaV3_5G004440' => 'csa', 'CsaV3_UNG137080' => 'csa', 'CsaV3_UNG144110' => 'csa', 'CsaV3_UNG218460' => 'csa', 'CSS0000404' => 'camsi', 'CSS0004981' => 'camsi', 'CSS0009750' => 'camsi', 'CSS0023687' => 'camsi', 'CSS0035524' => 'camsi', 'CSS0037699' => 'camsi', 'CSS0049947' => 'camsi', 'DCAR_004991' => 'dca', 'DCAR_008508' => 'dca', 'DCAR_009762' => 'dca', 'DCAR_010695' => 'dca', 'DCAR_011507' => 'dca', 'DCAR_014237' => 'dca', 'DCAR_021268' => 'dca', 'DCAR_027762' => 'dca', 'DCAR_027764' => 'dca', 'DCAR_031638' => 'dca', 'Dinv02425' => 'din', 'Dinv19990' => 'din', 'Dinv21659' => 'din', 'Dinv21927' => 'din', 'Dinv39170' => 'din', 'Dinv39171' => 'din', 'Duzib052G0179' => 'dzi', 'Duzib068G1125' => 'dzi', 'Duzib084G1186' => 'dzi', 'Duzib187G0805' => 'dzi', 'Duzib205G0096' => 'dzi', 'Duzib248G0800' => 'dzi', 'Duzib264G0741' => 'dzi', 'ECA232G2874' => 'eca', 'ECA233G2258' => 'eca', 'ECA233G3500' => 'eca', 'ECA234G0082' => 'eca', 'ECA234G1381' => 'eca', 'ECA236G4578' => 'eca', 'EL10Ac5g12342' => 'bvu', 'EL10Ac6g15077' => 'bvu', 'EL10Ac9g20848' => 'bvu', 'Eucgr.E00406' => 'egr', 'Eucgr.H04812' => 'egr', 'Eucgr.K01080' => 'egr', 'Eucgr.L03435' => 'egr', 'FAN02G0755' => 'fan', 'FAN04G2918' => 'fan', 'FAN05G2079' => 'fan', 'FAN05G5054' => 'fan', 'FAN08G3629' => 'fan', 'FAN11G2862' => 'fan', 'FAN13G2133' => 'fan', 'FAN14G5608' => 'fan', 'FAN14G5876' => 'fan', 'FAN18G2254' => 'fan', 'FAN18G2390' => 'fan', 'FAN18G3422' => 'fan', 'FAN18G4353' => 'fan', 'FAN18G4470' => 'fan', 'FAN19G2166' => 'fan', 'FAN23G2514' => 'fan', 'FAN26G0488' => 'fan', 'FAN28G1509' => 'fan', 'FvH4_1g21250' => 'fve', 'FvH4_1g27611' => 'fve', 'FvH4_3g38301' => 'fve', 'FvH4_5g19470' => 'fve', 'FvH4_5g28500' => 'fve', 'FvH4_6g23261' => 'fve', 'FvH4_6g26900' => 'fve', 'Glyma.01G207500' => 'gma', 'Glyma.05G062200' => 'gma', 'Glyma.05G180100' => 'gma', 'Glyma.06G285400' => 'gma', 'Glyma.11G035200' => 'gma', 'Glyma.12G120300' => 'gma', 'Glyma.14G125300' => 'gma', 'Glyma.17G144000' => 'gma', 'Glyma.17G144051' => 'gma', 'Gohir.1Z049317' => 'ghi', 'Gohir.A01G019800' => 'ghi', 'Gohir.A01G019900' => 'ghi', 'Gohir.A03G153650' => 'ghi', 'Gohir.A09G196500' => 'ghi', 'Gohir.A10G085600' => 'ghi', 'Gohir.A11G027400' => 'ghi', 'Gohir.A11G200400' => 'ghi', 'Gohir.A12G139700' => 'ghi', 'Gohir.A12G215400' => 'ghi', 'Gohir.D01G018400' => 'ghi', 'Gohir.D01G018500' => 'ghi', 'Gohir.D02G176600' => 'ghi', 'Gohir.D05G284800' => 'ghi', 'Gohir.D09G191100' => 'ghi', 'Gohir.D10G100150' => 'ghi', 'Gohir.D10G102900' => 'ghi', 'Gohir.D11G026600' => 'ghi', 'Gohir.D11G223300' => 'ghi', 'Gohir.D12G144200' => 'ghi', 'Gohir.D12G218000' => 'ghi', 'Gorai.002G020600' => 'gra', 'Gorai.002G020700' => 'gra', 'Gorai.005G198300' => 'gra', 'Gorai.006G213900' => 'gra', 'Gorai.007G028900' => 'gra', 'Gorai.007G240800' => 'gra', 'Gorai.008G155500' => 'gra', 'Gorai.008G233600' => 'gra', 'Gorai.009G299600' => 'gra', 'Gorai.011G109800' => 'gra', 'Gorai.011G112800' => 'gra', 'GSVIVG01002259001' => 'vvi', 'GSVIVG01005812001' => 'vvi', 'GSVIVG01016325001' => 'vvi', 'GSVIVG01018579001' => 'vvi', 'GSVIVG01018581001' => 'vvi', 'GSVIVG01020650001' => 'vvi', 'GSVIVG01022584001' => 'vvi', 'GSVIVG01023773001' => 'vvi', 'HanXRQChr04g0099171' => 'han', 'HanXRQChr05g0148551' => 'han', 'HanXRQChr08g0227741' => 'han', 'HanXRQChr10g0306311' => 'han', 'HanXRQChr16g0501091' => 'han', 'HanXRQChr16g0505851' => 'han', 'HanXRQChr16g0526381' => 'han', 'HanXRQChr16g0526411' => 'han', 'HanXRQChr17g0565241' => 'han', 'HanXRQChr17g0565261' => 'han', 'Haze_07942' => 'cav', 'Haze_13278' => 'cav', 'Haze_24957' => 'cav', 'Hma1.2p1_0002F.1_g002410' => 'hma', 'Hma1.2p1_0308F.1_g120070' => 'hma', 'Hma1.2p1_0316F.1_g122820' => 'hma', 'Hma1.2p1_1136F.1_g260540' => 'hma', 'HPP92_009241' => 'vpl', 'HPP92_022429' => 'vpl', 'HPP92_027388' => 'vpl', 'Hund00993' => 'sun', 'Hund07850' => 'sun', 'Hund07851' => 'sun', 'Hund13639' => 'sun', 'Hund13640' => 'sun', 'Hund14578' => 'sun', 'Hund16270' => 'sun', 'Hund28547' => 'sun', 'Hund28548' => 'sun', 'Lalb_Chr03g0029731' => 'lal', 'Lalb_Chr05g0214321' => 'lal', 'Lalb_Chr05g0214331' => 'lal', 'Lalb_Chr05g0214351' => 'lal', 'Lalb_Chr05g0221141' => 'lal', 'Lalb_Chr07g0185081' => 'lal', 'Lalb_Chr07g0185091' => 'lal', 'Lalb_Chr09g0329981' => 'lal', 'Lalb_Chr12g0203721' => 'lal', 'Lalb_Chr16g0386611' => 'lal', 'Lj2g0000811' => 'lja', 'Lj3g0009326' => 'lja', 'Lj3g0024792' => 'lja', 'Lj4A885T21' => 'lonja', 'Lj4g0007078' => 'lja', 'Lj4g0020838' => 'lja', 'Lj8A106G57' => 'lonja', 'Lj8A269T38' => 'lonja', 'Lsat_1_v5_gn_1_21640' => 'lsa', 'Lsat_1_v5_gn_4_141661' => 'lsa', 'Lsat_1_v5_gn_4_28480' => 'lsa', 'Lsat_1_v5_gn_4_28500' => 'lsa', 'Lsat_1_v5_gn_4_28520' => 'lsa', 'Lsat_1_v5_gn_6_18061' => 'lsa', 'Manes.01G083700' => 'mes', 'Manes.02G041600' => 'mes', 'Manes.12G092800' => 'mes', 'Manes.12G137000' => 'mes', 'Mapoly0007s0119' => 'mpo', 'Mapoly0014s0189' => 'mpo', 'Mapoly0169s0009' => 'mpo', 'MBI05_g34471_MAGBIO' => 'mbi', 'MBI07_g06445_MAGBIO' => 'mbi', 'MCO09G755' => 'mco', 'MCO11G871' => 'mco', 'MCO15G066' => 'mco', 'MD01G1026400' => 'mdo', 'MD04G1060500' => 'mdo', 'MD09G1241300' => 'mdo', 'MD09G1241500' => 'mdo', 'MD13G1127300' => 'mdo', 'MD15G1327100' => 'mdo', 'MD17G1234100' => 'mdo', 'Medtr2g033680' => 'mtr', 'Medtr3g435700' => 'mtr', 'Medtr4g079290' => 'mtr', 'Medtr4g091440' => 'mtr', 'Medtr4g100640' => 'mtr', 'Medtr5g012920' => 'mtr', 'Medtr6g464330' => 'mtr', 'Medtr8g090375' => 'mtr', 'MELO3C005515.2' => 'cme', 'MELO3C017590.2' => 'cme', 'MELO3C019320.2' => 'cme', 'Migut.A01136' => 'egut', 'Migut.L00107' => 'egut', 'Migut.M00195' => 'egut', 'MSTRG.12124' => 'ama', 'MSTRG.15727' => 'ama', 'Nitab4.5_0000104g0310' => 'nta', 'Nitab4.5_0001381g0040' => 'nta', 'Nitab4.5_0002196g0050' => 'nta', 'Nitab4.5_0002289g0160' => 'nta', 'Nitab4.5_0003050g0030' => 'nta', 'Nitab4.5_0004120g0020' => 'nta', 'Nitab4.5_0005651g0020' => 'nta', 'Nitab4.5_0006065g0010' => 'nta', 'Nn1g04278' => 'nnu', 'Nn6g33873' => 'nnu', 'Oeu000573.1' => 'oeu', 'Oeu000574.1' => 'oeu', 'Oeu038268.1' => 'oeu', 'Oeu040705.1' => 'oeu', 'Oeu056589.1' => 'oeu', 'Oeu062951.1' => 'oeu', 'Oeu064840.1' => 'oeu', 'Os06g0103500' => 'osa', 'Os06g0354500' => 'osa', 'Os11g0605500' => 'osa', 'Peaxi162Scf00214g00048' => 'pax', 'Peaxi162Scf00241g01211' => 'pax', 'Peaxi162Scf00422g00413' => 'pax', 'PGR042G1327' => 'pgr', 'PGR102G0764' => 'pgr', 'PGR142G0739' => 'pgr', 'PGSC0003DMG400004827' => 'stu', 'PGSC0003DMG400004828' => 'stu', 'PGSC0003DMG400010548' => 'stu', 'PGSC0003DMG400020620' => 'stu', 'PGSC0003DMG400021853' => 'stu', 'Phvul.002G056700' => 'pvu', 'Phvul.002G254200' => 'pvu', 'Phvul.002G254300' => 'pvu', 'Phvul.003G222800' => 'pvu', 'Phvul.009G116400' => 'pvu', 'Phvul.011G116000' => 'pvu', 'Potri.001G155500' => 'ptr', 'Potri.003G079200' => 'ptr', 'Potri.005G077600' => 'ptr', 'Potri.007G090400' => 'ptr', 'Potri.013G123500' => 'ptr', 'Potri.019G092600' => 'ptr', 'Pp3c13_22370' => 'ppa', 'Pp3c14_14860' => 'ppa', 'Pp3c26_540' => 'ppa', 'Pp3c5_8300' => 'ppa', 'Pp3c6_21500' => 'ppa', 'PRCOL_00006639' => 'pco', 'Prupe.3G127000' => 'ppe', 'Prupe.5G065100' => 'ppe', 'Prupe.6G181800' => 'ppe', 'Prupe.7G067100' => 'ppe', 'Psat0s625g0080' => 'psa', 'Psat2g176520' => 'psa', 'Psat3g079840' => 'psa', 'Psat3g079880' => 'psa', 'Psat4g072960' => 'psa', 'Psat4g198800' => 'psa', 'Psat6g218600' => 'psa', 'Psat7g054120' => 'psa', 'Psat7g126880' => 'psa', 'Psat7g166960' => 'psa', 'Psat7g202040' => 'psa', 'PSO063G6720' => 'pso', 'PSO210G2154' => 'pso', 'PSO447G0282' => 'pso', 'PSO541G4864' => 'pso', 'PSO675G3167' => 'pso', 'PSO782G5462' => 'pso', 'QL06p049990' => 'qlo', 'QL12p011360' => 'qlo', 'RcHm_v2.0_Chr1g0336421' => 'rch', 'RcHm_v2.0_Chr2g0115091' => 'rch', 'RcHm_v2.0_Chr2g0128641' => 'rch', 'RcHm_v2.0_Chr2g0152681' => 'rch', 'RcHm_v2.0_Chr3g0481201' => 'rch', 'RcHm_v2.0_Chr3g0481221' => 'rch', 'RcHm_v2.0_Chr6g0266281' => 'rch', 'RcHm_v2.0_Chr6g0266301' => 'rch', 'RcHm_v2.0_Chr7g0204041' => 'rch', 'RcHm_v2.0_Chr7g0206361' => 'rch', 'RcHm_v2.0_Chr7g0226181' => 'rch', 'Rhsim06G0135500' => 'rsi', 'Rhsim10G0158600' => 'rsi', 'Rhsim10G0158900' => 'rsi', 'Rhsim11G0003700' => 'rsi', 'Sabra01G0125000' => 'sbr', 'Sabra01G0125200' => 'sbr', 'Sabra03G0049400' => 'sbr', 'Sabra05G0063900' => 'sbr', 'Sabra07G0074100' => 'sbr', 'Sabra13G0102500' => 'sbr', 'Sabra19G0105800' => 'sbr', 'SalBow5G0613' => 'sbo', 'SalBow5G1748' => 'sbo', 'SalBow6G3759' => 'sbo', 'SalBow7G1339' => 'sbo', 'Sc06g0009140' => 'sci', 'Sc16g0005550' => 'sci', 'Sc22g0001000' => 'sci', 'Sed0001164' => 'sed', 'Sed0007318' => 'sed', 'Sed0012317' => 'sed', 'Sed0014357' => 'sed', 'Sed0021431' => 'sed', 'Sed0023908' => 'sed', 'SEGI_01087' => 'sgi', 'SEGI_03845' => 'sgi', 'SEGI_04770' => 'sgi', 'SEGI_09162' => 'sgi', 'SEGI_12300' => 'sgi', 'SEGI_12780' => 'sgi', 'SEGI_20270' => 'sgi', 'SEGI_20994' => 'sgi', 'SEGI_21730' => 'sgi', 'SEGI_25110' => 'sgi', 'SEGI_29810' => 'sgi', 'SEGI_33260' => 'sgi', 'SEGI_35715' => 'sgi', 'SEGI_36182' => 'sgi', 'SGA_v2.0_scaffold199G41219' => 'sas', 'SGA_v2.0_scaffold258G45790' => 'sas', 'SGA_v2.0_scaffold47G17760' => 'sas', 'SHI09349' => 'shi', 'SHI09350' => 'shi', 'SHI09353' => 'shi', 'SHI09357' => 'shi', 'SMO200G0037' => 'smo', 'SMO266G0061' => 'smo', 'SMO358G0542' => 'smo', 'Solyc04g054890.3' => 'sly', 'Solyc08g078400.3' => 'sly', 'Solyc10g008110.4' => 'sly', 'Sopen04g024690' => 'spe', 'Sopen08g026880' => 'spe', 'Sopen08g026890' => 'spe', 'Sopen10g003980' => 'spe', 'Sp1g05100' => 'spa', 'Sp2g28190' => 'spa', 'Sp4g17950' => 'spa', 'Sp7g17360' => 'spa', 'TAR376G0212' => 'tar', 'TAR627G0187' => 'tar', 'TAR629G1427' => 'tar', 'THA.LOC104799116' => 'tha', 'THA.LOC104800850' => 'tha', 'THA.LOC104806669' => 'tha', 'THA.LOC104812770' => 'tha', 'THA.LOC104814467' => 'tha', 'THA.LOC104815504' => 'tha', 'Thecc.01G104500' => 'tca', 'Thecc.02G188700' => 'tca', 'Thecc.03G247900' => 'tca', 'Thhalv10003747m.g' => 'esa', 'Thhalv10006988m.g' => 'esa', 'Thhalv10009440m.g' => 'esa', 'Thhalv10016360m.g' => 'esa', 'Thhalv10024621m.g' => 'esa', 'TPR.G11115' => 'tpr', 'TPR.G11439' => 'tpr', 'TPR.G18112' => 'tpr', 'TPR.G18124' => 'tpr', 'TPR.G18139' => 'tpr', 'TPR.G20916' => 'tpr', 'TPR.G21239' => 'tpr', 'TPR.G22740' => 'tpr', 'TPR.G28902' => 'tpr', 'TPR.G34856' => 'tpr', 'TPR.G36072' => 'tpr', 'TPR.G37610' => 'tpr', 'TPR.G39553' => 'tpr', 'TPR.G984' => 'tpr', 'TWI15G0242' => 'twi', 'TWI59G1279' => 'twi', 'TWI74G1627' => 'twi', 'TWI81G0453' => 'twi', 'unitig_747.g21753' => 'ugi', 'unitig_8.g3019' => 'ugi', 'vmacro00007' => 'vma', 'vmacro12355' => 'vma', 'vmacro12356' => 'vma', 'vmacro12946' => 'vma', 'VMungo0251G0701' => 'vmu', 'VMungo0251G0971' => 'vmu', 'VMungo1127G1013' => 'vmu', 'VMungo1127G1511' => 'vmu', 'VMungo1127G1678' => 'vmu', 'VMungo1127G1906' => 'vmu', 'VMungo1215G1615' => 'vmu', 'Zm00001eb016980' => 'zma', 'Zm00001eb083480' => 'zma', 'Zm00001eb148110' => 'zma', 'Zm00001eb167230' => 'zma', 'Zm00001eb200160' => 'zma', 'Zm00001eb259720' => 'zma', 'Zm00001eb334170' => 'zma', 'Zm00001eb376020' => 'zma', 'Zm00001eb379490' => 'zma' ) ) $data_type = 'gene_family' $gf_id = 'HOM05D001068' $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D001068' ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $subfamily_family_types = array( (int) 0 => 'ORTHOFAM' ) $parental_family_types = array( (int) 0 => 'HOMFAM' ) $gene_family_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $allowed_data_types = array( 'GO' => 'Gene Ontology', 'INTERPRO' => 'InterPro', 'GENE_FAMILY' => 'Gene Family' ) $data_identifier_value = 'HOM05D001068' $data_identifier_description = '' $adt_title = 'Gene Family' $adt = 'GENE_FAMILY' $is_selected = 'selected='selected'' $parameter = array( 'data_type' => 'GENE_FAMILY', 'data_value' => 'HOM05D001068' )
include - APP/View/Tools/similarity_heatmap.ctp, line 77 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::render() - CORE/Cake/View/View.php, line 473 Controller::render() - CORE/Cake/Controller/Controller.php, line 963 Dispatcher::_invoke() - CORE/Cake/Routing/Dispatcher.php, line 200 Dispatcher::dispatch() - CORE/Cake/Routing/Dispatcher.php, line 167 [main] - APP/webroot/index.php, line 151
Notice (8): Trying to access array offset on value of type null [APP/View/Tools/similarity_heatmap.ctp, line 77]Code Context <label>Source(s)</label> <select class='form form-select' name='ontology_source_group' id='ontology_source_group'> <?php foreach ($source_groups_information['available'] as $source_group_id) : ?> $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Tools/similarity_heatmap.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D001068', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '573', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'gene_selection' => array( 'parameters' => array( (int) 0 => array( [maximum depth reached] ) ), 'genes' => array( 'A01p20470' => 'bna', 'A03p19670' => 'bna', 'A06p31930' => 'bna', 'A09p08920' => 'bna', 'A10p05020' => 'bna', 'A10p05030' => 'bna', 'A10p05050' => 'bna', 'Aa31LG1G16860' => 'aar', 'Aa31LG1G7310' => 'aar', 'Aa31LG1G8290' => 'aar', 'Aa31LG1G8300' => 'aar', 'Aa31LG2G12940' => 'aar', 'Aa31LG9G12100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.114' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.999' => 'aag', 'Actinidia10988' => 'ach', 'Actinidia11120' => 'ach', 'Actinidia14405' => 'ach', 'Actinidia36601' => 'ach', 'Ah.01g003900' => 'amhyb', 'Ah.02g122190' => 'amhyb', 'Ah.07g198830' => 'amhyb', 'Ah.12g054350' => 'amhyb', 'AL1G16310' => 'aly', 'AL1G16320' => 'aly', 'AL4G31770' => 'aly', 'AL575U10010' => 'aly', 'AL7G37930' => 'aly', 'AL8G42610' => 'aly', 'Aqoxy1G02246_Aqoxy1G02247' => 'aox', 'Aqoxy3G02817' => 'aox', 'Aqoxy5G01973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.C7HVNL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9A8PV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JX5WJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWEA9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PINB5K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QXG3RX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDH47T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UDES1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZPM9RR' => 'arhy', 'AT1G06290' => 'ath', 'AT1G06310' => 'ath', 'AT2G35690' => 'ath', 'AT3G06690' => 'ath', 'AT4G16760' => 'ath', 'AT5G65110' => 'ath', 'ATR0057G009' => 'atr', 'ATR0564G071' => 'atr', 'ATR0602G078' => 'atr', 'Atru.chr4.128' => 'acertr', 'Atru.chr6.2845' => 'acertr', 'Atru.chr9.1272' => 'acertr', 'AUR62002026' => 'cqu', 'AUR62003772' => 'cqu', 'AUR62007112' => 'cqu', 'AUR62019981' => 'cqu', 'AUR62035386' => 'cqu', 'AUR62035387' => 'cqu', 'AUR62036084' => 'cqu', 'AUR62036085' => 'cqu', 'AUR62036086' => 'cqu', 'BcaB01g03886' => 'bca', 'BcaB02g06786' => 'bca', 'BcaB02g06788' => 'bca', 'BcaB02g06804' => 'bca', 'BcaB02g06806' => 'bca', 'BcaB02g06807' => 'bca', 'BcaB02g09862' => 'bca', 'BcaB04g20003' => 'bca', 'BcaC01g02740' => 'bca', 'BcaC01g05713' => 'bca', 'BcaC04g23270' => 'bca', 'BcaC05g24275' => 'bca', 'BcaC05g24277' => 'bca', 'BcaC05g24278' => 'bca', 'BcaC05g24280' => 'bca', 'BcaC05g24284' => 'bca', 'BcaC05g24285' => 'bca', 'BcaC05g24286' => 'bca', 'BcaC09g50411' => 'bca', 'BcaNung00152' => 'bca', 'BolC1t02524H' => 'bol', 'BolC3t14694H' => 'bol', 'BolC3t18364H' => 'bol', 'BolC5t29234H' => 'bol', 'BolC5t29235H' => 'bol', 'BolC5t29237H' => 'bol', 'BolC5t29403H' => 'bol', 'BolC6t35390H' => 'bol', 'BolC9t53936H' => 'bol', 'BraA01t01975Z' => 'bra', 'BraA03t11221Z' => 'bra', 'BraA06t26126Z' => 'bra', 'BraA09t36543Z' => 'bra', 'BraA10t42768Z' => 'bra', 'BraA10t42769Z' => 'bra', 'BraA10t42771Z' => 'bra', 'C01p25740' => 'bna', 'C03p22930' => 'bna', 'C03p61020' => 'bna', 'C05p04620' => 'bna', 'C05p04640' => 'bna', 'C09p10360' => 'bna', 'CAN.G1178.15' => 'can', 'CAN.G725.4' => 'can', 'CAN.G782.15' => 'can', 'CANSAT01G0317' => 'cansat', 'CANSAT21G1427' => 'cansat', 'CANSAT64G0075' => 'cansat', 'CARHR005870' => 'chi', 'CARHR129930' => 'chi', 'CARHR223330' => 'chi', 'CARHR279020' => 'chi', 'Carub.0001s0566' => 'cru', 'Carub.0001s0567' => 'cru', 'Carub.0004s1742' => 'cru', 'Carub.0007s2462' => 'cru', 'Carub.0008s2595' => 'cru', 'Ca_17724_v3' => 'car', 'Ca_18909_v3' => 'car', 'Ca_21988_v3' => 'car', 'Ca_21989_v3' => 'car', 'Ca_24593_v3' => 'car', 'Ca_30457_v3' => 'car', 'CBR_g12337' => 'cbr', 'CBR_g12338' => 'cbr', 'CBR_g30062' => 'cbr', 'Cc00_g26970' => 'ccan', 'Cc05_g07930' => 'ccan', 'Cc07_g15410' => 'ccan', 'Cc08_g12140' => 'ccan', 'CDE02G3830' => 'cde', 'CDE08G0847' => 'cde', 'CDE10G0713' => 'cde', 'CDE10G1075' => 'cde', 'Cfa002686' => 'cfa', 'Cfa012691' => 'cfa', 'Cfa014679' => 'cfa', 'Cfa021966' => 'cfa', 'Ciclev10014502m.g' => 'ccl', 'Ciclev10019196m.g' => 'ccl', 'Ciclev10025052m.g' => 'ccl', 'CiPaw.03G183200' => 'cil', 'CiPaw.04G097400' => 'cil', 'CiPaw.11G081900' => 'cil', 'CiPaw.12G050100' => 'cil', 'ClCG01G004240' => 'cla', 'ClCG02G010170' => 'cla', 'ClCG07G009580' => 'cla', 'COL.COLO4_03961' => 'col', 'COL.COLO4_04705' => 'col', 'COL.COLO4_04707' => 'col', 'COL.COLO4_09938' => 'col', 'COL.COLO4_37120' => 'col', 'Cpa.g.sc20.236' => 'cpa', 'Cpa.g.sc50.2' => 'cpa', 'Cpa.g.sc89.71' => 'cpa', 'Cre05.g232002' => 'cre', 'Cre11.g467350' => 'cre', 'Cre16.g687350' => 'cre', 'Cre16.g689050' => 'cre', 'CsaV3_2G034560' => 'csa', 'CsaV3_3G020890' => 'csa', 'CsaV3_4G004730' => 'csa', 'CsaV3_5G004440' => 'csa', 'CsaV3_UNG137080' => 'csa', 'CsaV3_UNG144110' => 'csa', 'CsaV3_UNG218460' => 'csa', 'CSS0000404' => 'camsi', 'CSS0004981' => 'camsi', 'CSS0009750' => 'camsi', 'CSS0023687' => 'camsi', 'CSS0035524' => 'camsi', 'CSS0037699' => 'camsi', 'CSS0049947' => 'camsi', 'DCAR_004991' => 'dca', 'DCAR_008508' => 'dca', 'DCAR_009762' => 'dca', 'DCAR_010695' => 'dca', 'DCAR_011507' => 'dca', 'DCAR_014237' => 'dca', 'DCAR_021268' => 'dca', 'DCAR_027762' => 'dca', 'DCAR_027764' => 'dca', 'DCAR_031638' => 'dca', 'Dinv02425' => 'din', 'Dinv19990' => 'din', 'Dinv21659' => 'din', 'Dinv21927' => 'din', 'Dinv39170' => 'din', 'Dinv39171' => 'din', 'Duzib052G0179' => 'dzi', 'Duzib068G1125' => 'dzi', 'Duzib084G1186' => 'dzi', 'Duzib187G0805' => 'dzi', 'Duzib205G0096' => 'dzi', 'Duzib248G0800' => 'dzi', 'Duzib264G0741' => 'dzi', 'ECA232G2874' => 'eca', 'ECA233G2258' => 'eca', 'ECA233G3500' => 'eca', 'ECA234G0082' => 'eca', 'ECA234G1381' => 'eca', 'ECA236G4578' => 'eca', 'EL10Ac5g12342' => 'bvu', 'EL10Ac6g15077' => 'bvu', 'EL10Ac9g20848' => 'bvu', 'Eucgr.E00406' => 'egr', 'Eucgr.H04812' => 'egr', 'Eucgr.K01080' => 'egr', 'Eucgr.L03435' => 'egr', 'FAN02G0755' => 'fan', 'FAN04G2918' => 'fan', 'FAN05G2079' => 'fan', 'FAN05G5054' => 'fan', 'FAN08G3629' => 'fan', 'FAN11G2862' => 'fan', 'FAN13G2133' => 'fan', 'FAN14G5608' => 'fan', 'FAN14G5876' => 'fan', 'FAN18G2254' => 'fan', 'FAN18G2390' => 'fan', 'FAN18G3422' => 'fan', 'FAN18G4353' => 'fan', 'FAN18G4470' => 'fan', 'FAN19G2166' => 'fan', 'FAN23G2514' => 'fan', 'FAN26G0488' => 'fan', 'FAN28G1509' => 'fan', 'FvH4_1g21250' => 'fve', 'FvH4_1g27611' => 'fve', 'FvH4_3g38301' => 'fve', 'FvH4_5g19470' => 'fve', 'FvH4_5g28500' => 'fve', 'FvH4_6g23261' => 'fve', 'FvH4_6g26900' => 'fve', 'Glyma.01G207500' => 'gma', 'Glyma.05G062200' => 'gma', 'Glyma.05G180100' => 'gma', 'Glyma.06G285400' => 'gma', 'Glyma.11G035200' => 'gma', 'Glyma.12G120300' => 'gma', 'Glyma.14G125300' => 'gma', 'Glyma.17G144000' => 'gma', 'Glyma.17G144051' => 'gma', 'Gohir.1Z049317' => 'ghi', 'Gohir.A01G019800' => 'ghi', 'Gohir.A01G019900' => 'ghi', 'Gohir.A03G153650' => 'ghi', 'Gohir.A09G196500' => 'ghi', 'Gohir.A10G085600' => 'ghi', 'Gohir.A11G027400' => 'ghi', 'Gohir.A11G200400' => 'ghi', 'Gohir.A12G139700' => 'ghi', 'Gohir.A12G215400' => 'ghi', 'Gohir.D01G018400' => 'ghi', 'Gohir.D01G018500' => 'ghi', 'Gohir.D02G176600' => 'ghi', 'Gohir.D05G284800' => 'ghi', 'Gohir.D09G191100' => 'ghi', 'Gohir.D10G100150' => 'ghi', 'Gohir.D10G102900' => 'ghi', 'Gohir.D11G026600' => 'ghi', 'Gohir.D11G223300' => 'ghi', 'Gohir.D12G144200' => 'ghi', 'Gohir.D12G218000' => 'ghi', 'Gorai.002G020600' => 'gra', 'Gorai.002G020700' => 'gra', 'Gorai.005G198300' => 'gra', 'Gorai.006G213900' => 'gra', 'Gorai.007G028900' => 'gra', 'Gorai.007G240800' => 'gra', 'Gorai.008G155500' => 'gra', 'Gorai.008G233600' => 'gra', 'Gorai.009G299600' => 'gra', 'Gorai.011G109800' => 'gra', 'Gorai.011G112800' => 'gra', 'GSVIVG01002259001' => 'vvi', 'GSVIVG01005812001' => 'vvi', 'GSVIVG01016325001' => 'vvi', 'GSVIVG01018579001' => 'vvi', 'GSVIVG01018581001' => 'vvi', 'GSVIVG01020650001' => 'vvi', 'GSVIVG01022584001' => 'vvi', 'GSVIVG01023773001' => 'vvi', 'HanXRQChr04g0099171' => 'han', 'HanXRQChr05g0148551' => 'han', 'HanXRQChr08g0227741' => 'han', 'HanXRQChr10g0306311' => 'han', 'HanXRQChr16g0501091' => 'han', 'HanXRQChr16g0505851' => 'han', 'HanXRQChr16g0526381' => 'han', 'HanXRQChr16g0526411' => 'han', 'HanXRQChr17g0565241' => 'han', 'HanXRQChr17g0565261' => 'han', 'Haze_07942' => 'cav', 'Haze_13278' => 'cav', 'Haze_24957' => 'cav', 'Hma1.2p1_0002F.1_g002410' => 'hma', 'Hma1.2p1_0308F.1_g120070' => 'hma', 'Hma1.2p1_0316F.1_g122820' => 'hma', 'Hma1.2p1_1136F.1_g260540' => 'hma', 'HPP92_009241' => 'vpl', 'HPP92_022429' => 'vpl', 'HPP92_027388' => 'vpl', 'Hund00993' => 'sun', 'Hund07850' => 'sun', 'Hund07851' => 'sun', 'Hund13639' => 'sun', 'Hund13640' => 'sun', 'Hund14578' => 'sun', 'Hund16270' => 'sun', 'Hund28547' => 'sun', 'Hund28548' => 'sun', 'Lalb_Chr03g0029731' => 'lal', 'Lalb_Chr05g0214321' => 'lal', 'Lalb_Chr05g0214331' => 'lal', 'Lalb_Chr05g0214351' => 'lal', 'Lalb_Chr05g0221141' => 'lal', 'Lalb_Chr07g0185081' => 'lal', 'Lalb_Chr07g0185091' => 'lal', 'Lalb_Chr09g0329981' => 'lal', 'Lalb_Chr12g0203721' => 'lal', 'Lalb_Chr16g0386611' => 'lal', 'Lj2g0000811' => 'lja', 'Lj3g0009326' => 'lja', 'Lj3g0024792' => 'lja', 'Lj4A885T21' => 'lonja', 'Lj4g0007078' => 'lja', 'Lj4g0020838' => 'lja', 'Lj8A106G57' => 'lonja', 'Lj8A269T38' => 'lonja', 'Lsat_1_v5_gn_1_21640' => 'lsa', 'Lsat_1_v5_gn_4_141661' => 'lsa', 'Lsat_1_v5_gn_4_28480' => 'lsa', 'Lsat_1_v5_gn_4_28500' => 'lsa', 'Lsat_1_v5_gn_4_28520' => 'lsa', 'Lsat_1_v5_gn_6_18061' => 'lsa', 'Manes.01G083700' => 'mes', 'Manes.02G041600' => 'mes', 'Manes.12G092800' => 'mes', 'Manes.12G137000' => 'mes', 'Mapoly0007s0119' => 'mpo', 'Mapoly0014s0189' => 'mpo', 'Mapoly0169s0009' => 'mpo', 'MBI05_g34471_MAGBIO' => 'mbi', 'MBI07_g06445_MAGBIO' => 'mbi', 'MCO09G755' => 'mco', 'MCO11G871' => 'mco', 'MCO15G066' => 'mco', 'MD01G1026400' => 'mdo', 'MD04G1060500' => 'mdo', 'MD09G1241300' => 'mdo', 'MD09G1241500' => 'mdo', 'MD13G1127300' => 'mdo', 'MD15G1327100' => 'mdo', 'MD17G1234100' => 'mdo', 'Medtr2g033680' => 'mtr', 'Medtr3g435700' => 'mtr', 'Medtr4g079290' => 'mtr', 'Medtr4g091440' => 'mtr', 'Medtr4g100640' => 'mtr', 'Medtr5g012920' => 'mtr', 'Medtr6g464330' => 'mtr', 'Medtr8g090375' => 'mtr', 'MELO3C005515.2' => 'cme', 'MELO3C017590.2' => 'cme', 'MELO3C019320.2' => 'cme', 'Migut.A01136' => 'egut', 'Migut.L00107' => 'egut', 'Migut.M00195' => 'egut', 'MSTRG.12124' => 'ama', 'MSTRG.15727' => 'ama', 'Nitab4.5_0000104g0310' => 'nta', 'Nitab4.5_0001381g0040' => 'nta', 'Nitab4.5_0002196g0050' => 'nta', 'Nitab4.5_0002289g0160' => 'nta', 'Nitab4.5_0003050g0030' => 'nta', 'Nitab4.5_0004120g0020' => 'nta', 'Nitab4.5_0005651g0020' => 'nta', 'Nitab4.5_0006065g0010' => 'nta', 'Nn1g04278' => 'nnu', 'Nn6g33873' => 'nnu', 'Oeu000573.1' => 'oeu', 'Oeu000574.1' => 'oeu', 'Oeu038268.1' => 'oeu', 'Oeu040705.1' => 'oeu', 'Oeu056589.1' => 'oeu', 'Oeu062951.1' => 'oeu', 'Oeu064840.1' => 'oeu', 'Os06g0103500' => 'osa', 'Os06g0354500' => 'osa', 'Os11g0605500' => 'osa', 'Peaxi162Scf00214g00048' => 'pax', 'Peaxi162Scf00241g01211' => 'pax', 'Peaxi162Scf00422g00413' => 'pax', 'PGR042G1327' => 'pgr', 'PGR102G0764' => 'pgr', 'PGR142G0739' => 'pgr', 'PGSC0003DMG400004827' => 'stu', 'PGSC0003DMG400004828' => 'stu', 'PGSC0003DMG400010548' => 'stu', 'PGSC0003DMG400020620' => 'stu', 'PGSC0003DMG400021853' => 'stu', 'Phvul.002G056700' => 'pvu', 'Phvul.002G254200' => 'pvu', 'Phvul.002G254300' => 'pvu', 'Phvul.003G222800' => 'pvu', 'Phvul.009G116400' => 'pvu', 'Phvul.011G116000' => 'pvu', 'Potri.001G155500' => 'ptr', 'Potri.003G079200' => 'ptr', 'Potri.005G077600' => 'ptr', 'Potri.007G090400' => 'ptr', 'Potri.013G123500' => 'ptr', 'Potri.019G092600' => 'ptr', 'Pp3c13_22370' => 'ppa', 'Pp3c14_14860' => 'ppa', 'Pp3c26_540' => 'ppa', 'Pp3c5_8300' => 'ppa', 'Pp3c6_21500' => 'ppa', 'PRCOL_00006639' => 'pco', 'Prupe.3G127000' => 'ppe', 'Prupe.5G065100' => 'ppe', 'Prupe.6G181800' => 'ppe', 'Prupe.7G067100' => 'ppe', 'Psat0s625g0080' => 'psa', 'Psat2g176520' => 'psa', 'Psat3g079840' => 'psa', 'Psat3g079880' => 'psa', 'Psat4g072960' => 'psa', 'Psat4g198800' => 'psa', 'Psat6g218600' => 'psa', 'Psat7g054120' => 'psa', 'Psat7g126880' => 'psa', 'Psat7g166960' => 'psa', 'Psat7g202040' => 'psa', 'PSO063G6720' => 'pso', 'PSO210G2154' => 'pso', 'PSO447G0282' => 'pso', 'PSO541G4864' => 'pso', 'PSO675G3167' => 'pso', 'PSO782G5462' => 'pso', 'QL06p049990' => 'qlo', 'QL12p011360' => 'qlo', 'RcHm_v2.0_Chr1g0336421' => 'rch', 'RcHm_v2.0_Chr2g0115091' => 'rch', 'RcHm_v2.0_Chr2g0128641' => 'rch', 'RcHm_v2.0_Chr2g0152681' => 'rch', 'RcHm_v2.0_Chr3g0481201' => 'rch', 'RcHm_v2.0_Chr3g0481221' => 'rch', 'RcHm_v2.0_Chr6g0266281' => 'rch', 'RcHm_v2.0_Chr6g0266301' => 'rch', 'RcHm_v2.0_Chr7g0204041' => 'rch', 'RcHm_v2.0_Chr7g0206361' => 'rch', 'RcHm_v2.0_Chr7g0226181' => 'rch', 'Rhsim06G0135500' => 'rsi', 'Rhsim10G0158600' => 'rsi', 'Rhsim10G0158900' => 'rsi', 'Rhsim11G0003700' => 'rsi', 'Sabra01G0125000' => 'sbr', 'Sabra01G0125200' => 'sbr', 'Sabra03G0049400' => 'sbr', 'Sabra05G0063900' => 'sbr', 'Sabra07G0074100' => 'sbr', 'Sabra13G0102500' => 'sbr', 'Sabra19G0105800' => 'sbr', 'SalBow5G0613' => 'sbo', 'SalBow5G1748' => 'sbo', 'SalBow6G3759' => 'sbo', 'SalBow7G1339' => 'sbo', 'Sc06g0009140' => 'sci', 'Sc16g0005550' => 'sci', 'Sc22g0001000' => 'sci', 'Sed0001164' => 'sed', 'Sed0007318' => 'sed', 'Sed0012317' => 'sed', 'Sed0014357' => 'sed', 'Sed0021431' => 'sed', 'Sed0023908' => 'sed', 'SEGI_01087' => 'sgi', 'SEGI_03845' => 'sgi', 'SEGI_04770' => 'sgi', 'SEGI_09162' => 'sgi', 'SEGI_12300' => 'sgi', 'SEGI_12780' => 'sgi', 'SEGI_20270' => 'sgi', 'SEGI_20994' => 'sgi', 'SEGI_21730' => 'sgi', 'SEGI_25110' => 'sgi', 'SEGI_29810' => 'sgi', 'SEGI_33260' => 'sgi', 'SEGI_35715' => 'sgi', 'SEGI_36182' => 'sgi', 'SGA_v2.0_scaffold199G41219' => 'sas', 'SGA_v2.0_scaffold258G45790' => 'sas', 'SGA_v2.0_scaffold47G17760' => 'sas', 'SHI09349' => 'shi', 'SHI09350' => 'shi', 'SHI09353' => 'shi', 'SHI09357' => 'shi', 'SMO200G0037' => 'smo', 'SMO266G0061' => 'smo', 'SMO358G0542' => 'smo', 'Solyc04g054890.3' => 'sly', 'Solyc08g078400.3' => 'sly', 'Solyc10g008110.4' => 'sly', 'Sopen04g024690' => 'spe', 'Sopen08g026880' => 'spe', 'Sopen08g026890' => 'spe', 'Sopen10g003980' => 'spe', 'Sp1g05100' => 'spa', 'Sp2g28190' => 'spa', 'Sp4g17950' => 'spa', 'Sp7g17360' => 'spa', 'TAR376G0212' => 'tar', 'TAR627G0187' => 'tar', 'TAR629G1427' => 'tar', 'THA.LOC104799116' => 'tha', 'THA.LOC104800850' => 'tha', 'THA.LOC104806669' => 'tha', 'THA.LOC104812770' => 'tha', 'THA.LOC104814467' => 'tha', 'THA.LOC104815504' => 'tha', 'Thecc.01G104500' => 'tca', 'Thecc.02G188700' => 'tca', 'Thecc.03G247900' => 'tca', 'Thhalv10003747m.g' => 'esa', 'Thhalv10006988m.g' => 'esa', 'Thhalv10009440m.g' => 'esa', 'Thhalv10016360m.g' => 'esa', 'Thhalv10024621m.g' => 'esa', 'TPR.G11115' => 'tpr', 'TPR.G11439' => 'tpr', 'TPR.G18112' => 'tpr', 'TPR.G18124' => 'tpr', 'TPR.G18139' => 'tpr', 'TPR.G20916' => 'tpr', 'TPR.G21239' => 'tpr', 'TPR.G22740' => 'tpr', 'TPR.G28902' => 'tpr', 'TPR.G34856' => 'tpr', 'TPR.G36072' => 'tpr', 'TPR.G37610' => 'tpr', 'TPR.G39553' => 'tpr', 'TPR.G984' => 'tpr', 'TWI15G0242' => 'twi', 'TWI59G1279' => 'twi', 'TWI74G1627' => 'twi', 'TWI81G0453' => 'twi', 'unitig_747.g21753' => 'ugi', 'unitig_8.g3019' => 'ugi', 'vmacro00007' => 'vma', 'vmacro12355' => 'vma', 'vmacro12356' => 'vma', 'vmacro12946' => 'vma', 'VMungo0251G0701' => 'vmu', 'VMungo0251G0971' => 'vmu', 'VMungo1127G1013' => 'vmu', 'VMungo1127G1511' => 'vmu', 'VMungo1127G1678' => 'vmu', 'VMungo1127G1906' => 'vmu', 'VMungo1215G1615' => 'vmu', 'Zm00001eb016980' => 'zma', 'Zm00001eb083480' => 'zma', 'Zm00001eb148110' => 'zma', 'Zm00001eb167230' => 'zma', 'Zm00001eb200160' => 'zma', 'Zm00001eb259720' => 'zma', 'Zm00001eb334170' => 'zma', 'Zm00001eb376020' => 'zma', 'Zm00001eb379490' => 'zma' ) ), 'data_type' => 'gene_family', 'gf_id' => 'HOM05D001068', 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D001068' ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'subfamily_family_types' => array( (int) 0 => 'ORTHOFAM' ), 'parental_family_types' => array( (int) 0 => 'HOMFAM' ), 'gene_family_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'allowed_data_types' => array( 'GO' => 'Gene Ontology', 'INTERPRO' => 'InterPro', 'GENE_FAMILY' => 'Gene Family' ) ) $sidebar_info = array( 'gf_id' => 'HOM05D001068', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '573', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $gene_selection = array( 'parameters' => array( (int) 0 => array( 'data_type' => 'GENE_FAMILY', 'data_value' => 'HOM05D001068' ) ), 'genes' => array( 'A01p20470' => 'bna', 'A03p19670' => 'bna', 'A06p31930' => 'bna', 'A09p08920' => 'bna', 'A10p05020' => 'bna', 'A10p05030' => 'bna', 'A10p05050' => 'bna', 'Aa31LG1G16860' => 'aar', 'Aa31LG1G7310' => 'aar', 'Aa31LG1G8290' => 'aar', 'Aa31LG1G8300' => 'aar', 'Aa31LG2G12940' => 'aar', 'Aa31LG9G12100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.114' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.999' => 'aag', 'Actinidia10988' => 'ach', 'Actinidia11120' => 'ach', 'Actinidia14405' => 'ach', 'Actinidia36601' => 'ach', 'Ah.01g003900' => 'amhyb', 'Ah.02g122190' => 'amhyb', 'Ah.07g198830' => 'amhyb', 'Ah.12g054350' => 'amhyb', 'AL1G16310' => 'aly', 'AL1G16320' => 'aly', 'AL4G31770' => 'aly', 'AL575U10010' => 'aly', 'AL7G37930' => 'aly', 'AL8G42610' => 'aly', 'Aqoxy1G02246_Aqoxy1G02247' => 'aox', 'Aqoxy3G02817' => 'aox', 'Aqoxy5G01973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.C7HVNL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9A8PV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JX5WJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWEA9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PINB5K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QXG3RX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDH47T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UDES1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZPM9RR' => 'arhy', 'AT1G06290' => 'ath', 'AT1G06310' => 'ath', 'AT2G35690' => 'ath', 'AT3G06690' => 'ath', 'AT4G16760' => 'ath', 'AT5G65110' => 'ath', 'ATR0057G009' => 'atr', 'ATR0564G071' => 'atr', 'ATR0602G078' => 'atr', 'Atru.chr4.128' => 'acertr', 'Atru.chr6.2845' => 'acertr', 'Atru.chr9.1272' => 'acertr', 'AUR62002026' => 'cqu', 'AUR62003772' => 'cqu', 'AUR62007112' => 'cqu', 'AUR62019981' => 'cqu', 'AUR62035386' => 'cqu', 'AUR62035387' => 'cqu', 'AUR62036084' => 'cqu', 'AUR62036085' => 'cqu', 'AUR62036086' => 'cqu', 'BcaB01g03886' => 'bca', 'BcaB02g06786' => 'bca', 'BcaB02g06788' => 'bca', 'BcaB02g06804' => 'bca', 'BcaB02g06806' => 'bca', 'BcaB02g06807' => 'bca', 'BcaB02g09862' => 'bca', 'BcaB04g20003' => 'bca', 'BcaC01g02740' => 'bca', 'BcaC01g05713' => 'bca', 'BcaC04g23270' => 'bca', 'BcaC05g24275' => 'bca', 'BcaC05g24277' => 'bca', 'BcaC05g24278' => 'bca', 'BcaC05g24280' => 'bca', 'BcaC05g24284' => 'bca', 'BcaC05g24285' => 'bca', 'BcaC05g24286' => 'bca', 'BcaC09g50411' => 'bca', 'BcaNung00152' => 'bca', 'BolC1t02524H' => 'bol', 'BolC3t14694H' => 'bol', 'BolC3t18364H' => 'bol', 'BolC5t29234H' => 'bol', 'BolC5t29235H' => 'bol', 'BolC5t29237H' => 'bol', 'BolC5t29403H' => 'bol', 'BolC6t35390H' => 'bol', 'BolC9t53936H' => 'bol', 'BraA01t01975Z' => 'bra', 'BraA03t11221Z' => 'bra', 'BraA06t26126Z' => 'bra', 'BraA09t36543Z' => 'bra', 'BraA10t42768Z' => 'bra', 'BraA10t42769Z' => 'bra', 'BraA10t42771Z' => 'bra', 'C01p25740' => 'bna', 'C03p22930' => 'bna', 'C03p61020' => 'bna', 'C05p04620' => 'bna', 'C05p04640' => 'bna', 'C09p10360' => 'bna', 'CAN.G1178.15' => 'can', 'CAN.G725.4' => 'can', 'CAN.G782.15' => 'can', 'CANSAT01G0317' => 'cansat', 'CANSAT21G1427' => 'cansat', 'CANSAT64G0075' => 'cansat', 'CARHR005870' => 'chi', 'CARHR129930' => 'chi', 'CARHR223330' => 'chi', 'CARHR279020' => 'chi', 'Carub.0001s0566' => 'cru', 'Carub.0001s0567' => 'cru', 'Carub.0004s1742' => 'cru', 'Carub.0007s2462' => 'cru', 'Carub.0008s2595' => 'cru', 'Ca_17724_v3' => 'car', 'Ca_18909_v3' => 'car', 'Ca_21988_v3' => 'car', 'Ca_21989_v3' => 'car', 'Ca_24593_v3' => 'car', 'Ca_30457_v3' => 'car', 'CBR_g12337' => 'cbr', 'CBR_g12338' => 'cbr', 'CBR_g30062' => 'cbr', 'Cc00_g26970' => 'ccan', 'Cc05_g07930' => 'ccan', 'Cc07_g15410' => 'ccan', 'Cc08_g12140' => 'ccan', 'CDE02G3830' => 'cde', 'CDE08G0847' => 'cde', 'CDE10G0713' => 'cde', 'CDE10G1075' => 'cde', 'Cfa002686' => 'cfa', 'Cfa012691' => 'cfa', 'Cfa014679' => 'cfa', 'Cfa021966' => 'cfa', 'Ciclev10014502m.g' => 'ccl', 'Ciclev10019196m.g' => 'ccl', 'Ciclev10025052m.g' => 'ccl', 'CiPaw.03G183200' => 'cil', 'CiPaw.04G097400' => 'cil', 'CiPaw.11G081900' => 'cil', 'CiPaw.12G050100' => 'cil', 'ClCG01G004240' => 'cla', 'ClCG02G010170' => 'cla', 'ClCG07G009580' => 'cla', 'COL.COLO4_03961' => 'col', 'COL.COLO4_04705' => 'col', 'COL.COLO4_04707' => 'col', 'COL.COLO4_09938' => 'col', 'COL.COLO4_37120' => 'col', 'Cpa.g.sc20.236' => 'cpa', 'Cpa.g.sc50.2' => 'cpa', 'Cpa.g.sc89.71' => 'cpa', 'Cre05.g232002' => 'cre', 'Cre11.g467350' => 'cre', 'Cre16.g687350' => 'cre', 'Cre16.g689050' => 'cre', 'CsaV3_2G034560' => 'csa', 'CsaV3_3G020890' => 'csa', 'CsaV3_4G004730' => 'csa', 'CsaV3_5G004440' => 'csa', 'CsaV3_UNG137080' => 'csa', 'CsaV3_UNG144110' => 'csa', 'CsaV3_UNG218460' => 'csa', 'CSS0000404' => 'camsi', 'CSS0004981' => 'camsi', 'CSS0009750' => 'camsi', 'CSS0023687' => 'camsi', 'CSS0035524' => 'camsi', 'CSS0037699' => 'camsi', 'CSS0049947' => 'camsi', 'DCAR_004991' => 'dca', 'DCAR_008508' => 'dca', 'DCAR_009762' => 'dca', 'DCAR_010695' => 'dca', 'DCAR_011507' => 'dca', 'DCAR_014237' => 'dca', 'DCAR_021268' => 'dca', 'DCAR_027762' => 'dca', 'DCAR_027764' => 'dca', 'DCAR_031638' => 'dca', 'Dinv02425' => 'din', 'Dinv19990' => 'din', 'Dinv21659' => 'din', 'Dinv21927' => 'din', 'Dinv39170' => 'din', 'Dinv39171' => 'din', 'Duzib052G0179' => 'dzi', 'Duzib068G1125' => 'dzi', 'Duzib084G1186' => 'dzi', 'Duzib187G0805' => 'dzi', 'Duzib205G0096' => 'dzi', 'Duzib248G0800' => 'dzi', 'Duzib264G0741' => 'dzi', 'ECA232G2874' => 'eca', 'ECA233G2258' => 'eca', 'ECA233G3500' => 'eca', 'ECA234G0082' => 'eca', 'ECA234G1381' => 'eca', 'ECA236G4578' => 'eca', 'EL10Ac5g12342' => 'bvu', 'EL10Ac6g15077' => 'bvu', 'EL10Ac9g20848' => 'bvu', 'Eucgr.E00406' => 'egr', 'Eucgr.H04812' => 'egr', 'Eucgr.K01080' => 'egr', 'Eucgr.L03435' => 'egr', 'FAN02G0755' => 'fan', 'FAN04G2918' => 'fan', 'FAN05G2079' => 'fan', 'FAN05G5054' => 'fan', 'FAN08G3629' => 'fan', 'FAN11G2862' => 'fan', 'FAN13G2133' => 'fan', 'FAN14G5608' => 'fan', 'FAN14G5876' => 'fan', 'FAN18G2254' => 'fan', 'FAN18G2390' => 'fan', 'FAN18G3422' => 'fan', 'FAN18G4353' => 'fan', 'FAN18G4470' => 'fan', 'FAN19G2166' => 'fan', 'FAN23G2514' => 'fan', 'FAN26G0488' => 'fan', 'FAN28G1509' => 'fan', 'FvH4_1g21250' => 'fve', 'FvH4_1g27611' => 'fve', 'FvH4_3g38301' => 'fve', 'FvH4_5g19470' => 'fve', 'FvH4_5g28500' => 'fve', 'FvH4_6g23261' => 'fve', 'FvH4_6g26900' => 'fve', 'Glyma.01G207500' => 'gma', 'Glyma.05G062200' => 'gma', 'Glyma.05G180100' => 'gma', 'Glyma.06G285400' => 'gma', 'Glyma.11G035200' => 'gma', 'Glyma.12G120300' => 'gma', 'Glyma.14G125300' => 'gma', 'Glyma.17G144000' => 'gma', 'Glyma.17G144051' => 'gma', 'Gohir.1Z049317' => 'ghi', 'Gohir.A01G019800' => 'ghi', 'Gohir.A01G019900' => 'ghi', 'Gohir.A03G153650' => 'ghi', 'Gohir.A09G196500' => 'ghi', 'Gohir.A10G085600' => 'ghi', 'Gohir.A11G027400' => 'ghi', 'Gohir.A11G200400' => 'ghi', 'Gohir.A12G139700' => 'ghi', 'Gohir.A12G215400' => 'ghi', 'Gohir.D01G018400' => 'ghi', 'Gohir.D01G018500' => 'ghi', 'Gohir.D02G176600' => 'ghi', 'Gohir.D05G284800' => 'ghi', 'Gohir.D09G191100' => 'ghi', 'Gohir.D10G100150' => 'ghi', 'Gohir.D10G102900' => 'ghi', 'Gohir.D11G026600' => 'ghi', 'Gohir.D11G223300' => 'ghi', 'Gohir.D12G144200' => 'ghi', 'Gohir.D12G218000' => 'ghi', 'Gorai.002G020600' => 'gra', 'Gorai.002G020700' => 'gra', 'Gorai.005G198300' => 'gra', 'Gorai.006G213900' => 'gra', 'Gorai.007G028900' => 'gra', 'Gorai.007G240800' => 'gra', 'Gorai.008G155500' => 'gra', 'Gorai.008G233600' => 'gra', 'Gorai.009G299600' => 'gra', 'Gorai.011G109800' => 'gra', 'Gorai.011G112800' => 'gra', 'GSVIVG01002259001' => 'vvi', 'GSVIVG01005812001' => 'vvi', 'GSVIVG01016325001' => 'vvi', 'GSVIVG01018579001' => 'vvi', 'GSVIVG01018581001' => 'vvi', 'GSVIVG01020650001' => 'vvi', 'GSVIVG01022584001' => 'vvi', 'GSVIVG01023773001' => 'vvi', 'HanXRQChr04g0099171' => 'han', 'HanXRQChr05g0148551' => 'han', 'HanXRQChr08g0227741' => 'han', 'HanXRQChr10g0306311' => 'han', 'HanXRQChr16g0501091' => 'han', 'HanXRQChr16g0505851' => 'han', 'HanXRQChr16g0526381' => 'han', 'HanXRQChr16g0526411' => 'han', 'HanXRQChr17g0565241' => 'han', 'HanXRQChr17g0565261' => 'han', 'Haze_07942' => 'cav', 'Haze_13278' => 'cav', 'Haze_24957' => 'cav', 'Hma1.2p1_0002F.1_g002410' => 'hma', 'Hma1.2p1_0308F.1_g120070' => 'hma', 'Hma1.2p1_0316F.1_g122820' => 'hma', 'Hma1.2p1_1136F.1_g260540' => 'hma', 'HPP92_009241' => 'vpl', 'HPP92_022429' => 'vpl', 'HPP92_027388' => 'vpl', 'Hund00993' => 'sun', 'Hund07850' => 'sun', 'Hund07851' => 'sun', 'Hund13639' => 'sun', 'Hund13640' => 'sun', 'Hund14578' => 'sun', 'Hund16270' => 'sun', 'Hund28547' => 'sun', 'Hund28548' => 'sun', 'Lalb_Chr03g0029731' => 'lal', 'Lalb_Chr05g0214321' => 'lal', 'Lalb_Chr05g0214331' => 'lal', 'Lalb_Chr05g0214351' => 'lal', 'Lalb_Chr05g0221141' => 'lal', 'Lalb_Chr07g0185081' => 'lal', 'Lalb_Chr07g0185091' => 'lal', 'Lalb_Chr09g0329981' => 'lal', 'Lalb_Chr12g0203721' => 'lal', 'Lalb_Chr16g0386611' => 'lal', 'Lj2g0000811' => 'lja', 'Lj3g0009326' => 'lja', 'Lj3g0024792' => 'lja', 'Lj4A885T21' => 'lonja', 'Lj4g0007078' => 'lja', 'Lj4g0020838' => 'lja', 'Lj8A106G57' => 'lonja', 'Lj8A269T38' => 'lonja', 'Lsat_1_v5_gn_1_21640' => 'lsa', 'Lsat_1_v5_gn_4_141661' => 'lsa', 'Lsat_1_v5_gn_4_28480' => 'lsa', 'Lsat_1_v5_gn_4_28500' => 'lsa', 'Lsat_1_v5_gn_4_28520' => 'lsa', 'Lsat_1_v5_gn_6_18061' => 'lsa', 'Manes.01G083700' => 'mes', 'Manes.02G041600' => 'mes', 'Manes.12G092800' => 'mes', 'Manes.12G137000' => 'mes', 'Mapoly0007s0119' => 'mpo', 'Mapoly0014s0189' => 'mpo', 'Mapoly0169s0009' => 'mpo', 'MBI05_g34471_MAGBIO' => 'mbi', 'MBI07_g06445_MAGBIO' => 'mbi', 'MCO09G755' => 'mco', 'MCO11G871' => 'mco', 'MCO15G066' => 'mco', 'MD01G1026400' => 'mdo', 'MD04G1060500' => 'mdo', 'MD09G1241300' => 'mdo', 'MD09G1241500' => 'mdo', 'MD13G1127300' => 'mdo', 'MD15G1327100' => 'mdo', 'MD17G1234100' => 'mdo', 'Medtr2g033680' => 'mtr', 'Medtr3g435700' => 'mtr', 'Medtr4g079290' => 'mtr', 'Medtr4g091440' => 'mtr', 'Medtr4g100640' => 'mtr', 'Medtr5g012920' => 'mtr', 'Medtr6g464330' => 'mtr', 'Medtr8g090375' => 'mtr', 'MELO3C005515.2' => 'cme', 'MELO3C017590.2' => 'cme', 'MELO3C019320.2' => 'cme', 'Migut.A01136' => 'egut', 'Migut.L00107' => 'egut', 'Migut.M00195' => 'egut', 'MSTRG.12124' => 'ama', 'MSTRG.15727' => 'ama', 'Nitab4.5_0000104g0310' => 'nta', 'Nitab4.5_0001381g0040' => 'nta', 'Nitab4.5_0002196g0050' => 'nta', 'Nitab4.5_0002289g0160' => 'nta', 'Nitab4.5_0003050g0030' => 'nta', 'Nitab4.5_0004120g0020' => 'nta', 'Nitab4.5_0005651g0020' => 'nta', 'Nitab4.5_0006065g0010' => 'nta', 'Nn1g04278' => 'nnu', 'Nn6g33873' => 'nnu', 'Oeu000573.1' => 'oeu', 'Oeu000574.1' => 'oeu', 'Oeu038268.1' => 'oeu', 'Oeu040705.1' => 'oeu', 'Oeu056589.1' => 'oeu', 'Oeu062951.1' => 'oeu', 'Oeu064840.1' => 'oeu', 'Os06g0103500' => 'osa', 'Os06g0354500' => 'osa', 'Os11g0605500' => 'osa', 'Peaxi162Scf00214g00048' => 'pax', 'Peaxi162Scf00241g01211' => 'pax', 'Peaxi162Scf00422g00413' => 'pax', 'PGR042G1327' => 'pgr', 'PGR102G0764' => 'pgr', 'PGR142G0739' => 'pgr', 'PGSC0003DMG400004827' => 'stu', 'PGSC0003DMG400004828' => 'stu', 'PGSC0003DMG400010548' => 'stu', 'PGSC0003DMG400020620' => 'stu', 'PGSC0003DMG400021853' => 'stu', 'Phvul.002G056700' => 'pvu', 'Phvul.002G254200' => 'pvu', 'Phvul.002G254300' => 'pvu', 'Phvul.003G222800' => 'pvu', 'Phvul.009G116400' => 'pvu', 'Phvul.011G116000' => 'pvu', 'Potri.001G155500' => 'ptr', 'Potri.003G079200' => 'ptr', 'Potri.005G077600' => 'ptr', 'Potri.007G090400' => 'ptr', 'Potri.013G123500' => 'ptr', 'Potri.019G092600' => 'ptr', 'Pp3c13_22370' => 'ppa', 'Pp3c14_14860' => 'ppa', 'Pp3c26_540' => 'ppa', 'Pp3c5_8300' => 'ppa', 'Pp3c6_21500' => 'ppa', 'PRCOL_00006639' => 'pco', 'Prupe.3G127000' => 'ppe', 'Prupe.5G065100' => 'ppe', 'Prupe.6G181800' => 'ppe', 'Prupe.7G067100' => 'ppe', 'Psat0s625g0080' => 'psa', 'Psat2g176520' => 'psa', 'Psat3g079840' => 'psa', 'Psat3g079880' => 'psa', 'Psat4g072960' => 'psa', 'Psat4g198800' => 'psa', 'Psat6g218600' => 'psa', 'Psat7g054120' => 'psa', 'Psat7g126880' => 'psa', 'Psat7g166960' => 'psa', 'Psat7g202040' => 'psa', 'PSO063G6720' => 'pso', 'PSO210G2154' => 'pso', 'PSO447G0282' => 'pso', 'PSO541G4864' => 'pso', 'PSO675G3167' => 'pso', 'PSO782G5462' => 'pso', 'QL06p049990' => 'qlo', 'QL12p011360' => 'qlo', 'RcHm_v2.0_Chr1g0336421' => 'rch', 'RcHm_v2.0_Chr2g0115091' => 'rch', 'RcHm_v2.0_Chr2g0128641' => 'rch', 'RcHm_v2.0_Chr2g0152681' => 'rch', 'RcHm_v2.0_Chr3g0481201' => 'rch', 'RcHm_v2.0_Chr3g0481221' => 'rch', 'RcHm_v2.0_Chr6g0266281' => 'rch', 'RcHm_v2.0_Chr6g0266301' => 'rch', 'RcHm_v2.0_Chr7g0204041' => 'rch', 'RcHm_v2.0_Chr7g0206361' => 'rch', 'RcHm_v2.0_Chr7g0226181' => 'rch', 'Rhsim06G0135500' => 'rsi', 'Rhsim10G0158600' => 'rsi', 'Rhsim10G0158900' => 'rsi', 'Rhsim11G0003700' => 'rsi', 'Sabra01G0125000' => 'sbr', 'Sabra01G0125200' => 'sbr', 'Sabra03G0049400' => 'sbr', 'Sabra05G0063900' => 'sbr', 'Sabra07G0074100' => 'sbr', 'Sabra13G0102500' => 'sbr', 'Sabra19G0105800' => 'sbr', 'SalBow5G0613' => 'sbo', 'SalBow5G1748' => 'sbo', 'SalBow6G3759' => 'sbo', 'SalBow7G1339' => 'sbo', 'Sc06g0009140' => 'sci', 'Sc16g0005550' => 'sci', 'Sc22g0001000' => 'sci', 'Sed0001164' => 'sed', 'Sed0007318' => 'sed', 'Sed0012317' => 'sed', 'Sed0014357' => 'sed', 'Sed0021431' => 'sed', 'Sed0023908' => 'sed', 'SEGI_01087' => 'sgi', 'SEGI_03845' => 'sgi', 'SEGI_04770' => 'sgi', 'SEGI_09162' => 'sgi', 'SEGI_12300' => 'sgi', 'SEGI_12780' => 'sgi', 'SEGI_20270' => 'sgi', 'SEGI_20994' => 'sgi', 'SEGI_21730' => 'sgi', 'SEGI_25110' => 'sgi', 'SEGI_29810' => 'sgi', 'SEGI_33260' => 'sgi', 'SEGI_35715' => 'sgi', 'SEGI_36182' => 'sgi', 'SGA_v2.0_scaffold199G41219' => 'sas', 'SGA_v2.0_scaffold258G45790' => 'sas', 'SGA_v2.0_scaffold47G17760' => 'sas', 'SHI09349' => 'shi', 'SHI09350' => 'shi', 'SHI09353' => 'shi', 'SHI09357' => 'shi', 'SMO200G0037' => 'smo', 'SMO266G0061' => 'smo', 'SMO358G0542' => 'smo', 'Solyc04g054890.3' => 'sly', 'Solyc08g078400.3' => 'sly', 'Solyc10g008110.4' => 'sly', 'Sopen04g024690' => 'spe', 'Sopen08g026880' => 'spe', 'Sopen08g026890' => 'spe', 'Sopen10g003980' => 'spe', 'Sp1g05100' => 'spa', 'Sp2g28190' => 'spa', 'Sp4g17950' => 'spa', 'Sp7g17360' => 'spa', 'TAR376G0212' => 'tar', 'TAR627G0187' => 'tar', 'TAR629G1427' => 'tar', 'THA.LOC104799116' => 'tha', 'THA.LOC104800850' => 'tha', 'THA.LOC104806669' => 'tha', 'THA.LOC104812770' => 'tha', 'THA.LOC104814467' => 'tha', 'THA.LOC104815504' => 'tha', 'Thecc.01G104500' => 'tca', 'Thecc.02G188700' => 'tca', 'Thecc.03G247900' => 'tca', 'Thhalv10003747m.g' => 'esa', 'Thhalv10006988m.g' => 'esa', 'Thhalv10009440m.g' => 'esa', 'Thhalv10016360m.g' => 'esa', 'Thhalv10024621m.g' => 'esa', 'TPR.G11115' => 'tpr', 'TPR.G11439' => 'tpr', 'TPR.G18112' => 'tpr', 'TPR.G18124' => 'tpr', 'TPR.G18139' => 'tpr', 'TPR.G20916' => 'tpr', 'TPR.G21239' => 'tpr', 'TPR.G22740' => 'tpr', 'TPR.G28902' => 'tpr', 'TPR.G34856' => 'tpr', 'TPR.G36072' => 'tpr', 'TPR.G37610' => 'tpr', 'TPR.G39553' => 'tpr', 'TPR.G984' => 'tpr', 'TWI15G0242' => 'twi', 'TWI59G1279' => 'twi', 'TWI74G1627' => 'twi', 'TWI81G0453' => 'twi', 'unitig_747.g21753' => 'ugi', 'unitig_8.g3019' => 'ugi', 'vmacro00007' => 'vma', 'vmacro12355' => 'vma', 'vmacro12356' => 'vma', 'vmacro12946' => 'vma', 'VMungo0251G0701' => 'vmu', 'VMungo0251G0971' => 'vmu', 'VMungo1127G1013' => 'vmu', 'VMungo1127G1511' => 'vmu', 'VMungo1127G1678' => 'vmu', 'VMungo1127G1906' => 'vmu', 'VMungo1215G1615' => 'vmu', 'Zm00001eb016980' => 'zma', 'Zm00001eb083480' => 'zma', 'Zm00001eb148110' => 'zma', 'Zm00001eb167230' => 'zma', 'Zm00001eb200160' => 'zma', 'Zm00001eb259720' => 'zma', 'Zm00001eb334170' => 'zma', 'Zm00001eb376020' => 'zma', 'Zm00001eb379490' => 'zma' ) ) $data_type = 'gene_family' $gf_id = 'HOM05D001068' $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D001068' ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $subfamily_family_types = array( (int) 0 => 'ORTHOFAM' ) $parental_family_types = array( (int) 0 => 'HOMFAM' ) $gene_family_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $allowed_data_types = array( 'GO' => 'Gene Ontology', 'INTERPRO' => 'InterPro', 'GENE_FAMILY' => 'Gene Family' ) $data_identifier_value = 'HOM05D001068' $data_identifier_description = '' $adt_title = 'Gene Family' $adt = 'GENE_FAMILY' $is_selected = 'selected='selected'' $parameter = array( 'data_type' => 'GENE_FAMILY', 'data_value' => 'HOM05D001068' )include - APP/View/Tools/similarity_heatmap.ctp, line 77 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::render() - CORE/Cake/View/View.php, line 473 Controller::render() - CORE/Cake/Controller/Controller.php, line 963 Dispatcher::_invoke() - CORE/Cake/Routing/Dispatcher.php, line 200 Dispatcher::dispatch() - CORE/Cake/Routing/Dispatcher.php, line 167 [main] - APP/webroot/index.php, line 151
Warning (2): Invalid argument supplied for foreach() [APP/View/Tools/similarity_heatmap.ctp, line 77]Code Context <label>Source(s)</label> <select class='form form-select' name='ontology_source_group' id='ontology_source_group'> <?php foreach ($source_groups_information['available'] as $source_group_id) : ?> $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Tools/similarity_heatmap.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D001068', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '573', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'gene_selection' => array( 'parameters' => array( (int) 0 => array( [maximum depth reached] ) ), 'genes' => array( 'A01p20470' => 'bna', 'A03p19670' => 'bna', 'A06p31930' => 'bna', 'A09p08920' => 'bna', 'A10p05020' => 'bna', 'A10p05030' => 'bna', 'A10p05050' => 'bna', 'Aa31LG1G16860' => 'aar', 'Aa31LG1G7310' => 'aar', 'Aa31LG1G8290' => 'aar', 'Aa31LG1G8300' => 'aar', 'Aa31LG2G12940' => 'aar', 'Aa31LG9G12100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.114' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.999' => 'aag', 'Actinidia10988' => 'ach', 'Actinidia11120' => 'ach', 'Actinidia14405' => 'ach', 'Actinidia36601' => 'ach', 'Ah.01g003900' => 'amhyb', 'Ah.02g122190' => 'amhyb', 'Ah.07g198830' => 'amhyb', 'Ah.12g054350' => 'amhyb', 'AL1G16310' => 'aly', 'AL1G16320' => 'aly', 'AL4G31770' => 'aly', 'AL575U10010' => 'aly', 'AL7G37930' => 'aly', 'AL8G42610' => 'aly', 'Aqoxy1G02246_Aqoxy1G02247' => 'aox', 'Aqoxy3G02817' => 'aox', 'Aqoxy5G01973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.C7HVNL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9A8PV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JX5WJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWEA9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PINB5K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QXG3RX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDH47T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UDES1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZPM9RR' => 'arhy', 'AT1G06290' => 'ath', 'AT1G06310' => 'ath', 'AT2G35690' => 'ath', 'AT3G06690' => 'ath', 'AT4G16760' => 'ath', 'AT5G65110' => 'ath', 'ATR0057G009' => 'atr', 'ATR0564G071' => 'atr', 'ATR0602G078' => 'atr', 'Atru.chr4.128' => 'acertr', 'Atru.chr6.2845' => 'acertr', 'Atru.chr9.1272' => 'acertr', 'AUR62002026' => 'cqu', 'AUR62003772' => 'cqu', 'AUR62007112' => 'cqu', 'AUR62019981' => 'cqu', 'AUR62035386' => 'cqu', 'AUR62035387' => 'cqu', 'AUR62036084' => 'cqu', 'AUR62036085' => 'cqu', 'AUR62036086' => 'cqu', 'BcaB01g03886' => 'bca', 'BcaB02g06786' => 'bca', 'BcaB02g06788' => 'bca', 'BcaB02g06804' => 'bca', 'BcaB02g06806' => 'bca', 'BcaB02g06807' => 'bca', 'BcaB02g09862' => 'bca', 'BcaB04g20003' => 'bca', 'BcaC01g02740' => 'bca', 'BcaC01g05713' => 'bca', 'BcaC04g23270' => 'bca', 'BcaC05g24275' => 'bca', 'BcaC05g24277' => 'bca', 'BcaC05g24278' => 'bca', 'BcaC05g24280' => 'bca', 'BcaC05g24284' => 'bca', 'BcaC05g24285' => 'bca', 'BcaC05g24286' => 'bca', 'BcaC09g50411' => 'bca', 'BcaNung00152' => 'bca', 'BolC1t02524H' => 'bol', 'BolC3t14694H' => 'bol', 'BolC3t18364H' => 'bol', 'BolC5t29234H' => 'bol', 'BolC5t29235H' => 'bol', 'BolC5t29237H' => 'bol', 'BolC5t29403H' => 'bol', 'BolC6t35390H' => 'bol', 'BolC9t53936H' => 'bol', 'BraA01t01975Z' => 'bra', 'BraA03t11221Z' => 'bra', 'BraA06t26126Z' => 'bra', 'BraA09t36543Z' => 'bra', 'BraA10t42768Z' => 'bra', 'BraA10t42769Z' => 'bra', 'BraA10t42771Z' => 'bra', 'C01p25740' => 'bna', 'C03p22930' => 'bna', 'C03p61020' => 'bna', 'C05p04620' => 'bna', 'C05p04640' => 'bna', 'C09p10360' => 'bna', 'CAN.G1178.15' => 'can', 'CAN.G725.4' => 'can', 'CAN.G782.15' => 'can', 'CANSAT01G0317' => 'cansat', 'CANSAT21G1427' => 'cansat', 'CANSAT64G0075' => 'cansat', 'CARHR005870' => 'chi', 'CARHR129930' => 'chi', 'CARHR223330' => 'chi', 'CARHR279020' => 'chi', 'Carub.0001s0566' => 'cru', 'Carub.0001s0567' => 'cru', 'Carub.0004s1742' => 'cru', 'Carub.0007s2462' => 'cru', 'Carub.0008s2595' => 'cru', 'Ca_17724_v3' => 'car', 'Ca_18909_v3' => 'car', 'Ca_21988_v3' => 'car', 'Ca_21989_v3' => 'car', 'Ca_24593_v3' => 'car', 'Ca_30457_v3' => 'car', 'CBR_g12337' => 'cbr', 'CBR_g12338' => 'cbr', 'CBR_g30062' => 'cbr', 'Cc00_g26970' => 'ccan', 'Cc05_g07930' => 'ccan', 'Cc07_g15410' => 'ccan', 'Cc08_g12140' => 'ccan', 'CDE02G3830' => 'cde', 'CDE08G0847' => 'cde', 'CDE10G0713' => 'cde', 'CDE10G1075' => 'cde', 'Cfa002686' => 'cfa', 'Cfa012691' => 'cfa', 'Cfa014679' => 'cfa', 'Cfa021966' => 'cfa', 'Ciclev10014502m.g' => 'ccl', 'Ciclev10019196m.g' => 'ccl', 'Ciclev10025052m.g' => 'ccl', 'CiPaw.03G183200' => 'cil', 'CiPaw.04G097400' => 'cil', 'CiPaw.11G081900' => 'cil', 'CiPaw.12G050100' => 'cil', 'ClCG01G004240' => 'cla', 'ClCG02G010170' => 'cla', 'ClCG07G009580' => 'cla', 'COL.COLO4_03961' => 'col', 'COL.COLO4_04705' => 'col', 'COL.COLO4_04707' => 'col', 'COL.COLO4_09938' => 'col', 'COL.COLO4_37120' => 'col', 'Cpa.g.sc20.236' => 'cpa', 'Cpa.g.sc50.2' => 'cpa', 'Cpa.g.sc89.71' => 'cpa', 'Cre05.g232002' => 'cre', 'Cre11.g467350' => 'cre', 'Cre16.g687350' => 'cre', 'Cre16.g689050' => 'cre', 'CsaV3_2G034560' => 'csa', 'CsaV3_3G020890' => 'csa', 'CsaV3_4G004730' => 'csa', 'CsaV3_5G004440' => 'csa', 'CsaV3_UNG137080' => 'csa', 'CsaV3_UNG144110' => 'csa', 'CsaV3_UNG218460' => 'csa', 'CSS0000404' => 'camsi', 'CSS0004981' => 'camsi', 'CSS0009750' => 'camsi', 'CSS0023687' => 'camsi', 'CSS0035524' => 'camsi', 'CSS0037699' => 'camsi', 'CSS0049947' => 'camsi', 'DCAR_004991' => 'dca', 'DCAR_008508' => 'dca', 'DCAR_009762' => 'dca', 'DCAR_010695' => 'dca', 'DCAR_011507' => 'dca', 'DCAR_014237' => 'dca', 'DCAR_021268' => 'dca', 'DCAR_027762' => 'dca', 'DCAR_027764' => 'dca', 'DCAR_031638' => 'dca', 'Dinv02425' => 'din', 'Dinv19990' => 'din', 'Dinv21659' => 'din', 'Dinv21927' => 'din', 'Dinv39170' => 'din', 'Dinv39171' => 'din', 'Duzib052G0179' => 'dzi', 'Duzib068G1125' => 'dzi', 'Duzib084G1186' => 'dzi', 'Duzib187G0805' => 'dzi', 'Duzib205G0096' => 'dzi', 'Duzib248G0800' => 'dzi', 'Duzib264G0741' => 'dzi', 'ECA232G2874' => 'eca', 'ECA233G2258' => 'eca', 'ECA233G3500' => 'eca', 'ECA234G0082' => 'eca', 'ECA234G1381' => 'eca', 'ECA236G4578' => 'eca', 'EL10Ac5g12342' => 'bvu', 'EL10Ac6g15077' => 'bvu', 'EL10Ac9g20848' => 'bvu', 'Eucgr.E00406' => 'egr', 'Eucgr.H04812' => 'egr', 'Eucgr.K01080' => 'egr', 'Eucgr.L03435' => 'egr', 'FAN02G0755' => 'fan', 'FAN04G2918' => 'fan', 'FAN05G2079' => 'fan', 'FAN05G5054' => 'fan', 'FAN08G3629' => 'fan', 'FAN11G2862' => 'fan', 'FAN13G2133' => 'fan', 'FAN14G5608' => 'fan', 'FAN14G5876' => 'fan', 'FAN18G2254' => 'fan', 'FAN18G2390' => 'fan', 'FAN18G3422' => 'fan', 'FAN18G4353' => 'fan', 'FAN18G4470' => 'fan', 'FAN19G2166' => 'fan', 'FAN23G2514' => 'fan', 'FAN26G0488' => 'fan', 'FAN28G1509' => 'fan', 'FvH4_1g21250' => 'fve', 'FvH4_1g27611' => 'fve', 'FvH4_3g38301' => 'fve', 'FvH4_5g19470' => 'fve', 'FvH4_5g28500' => 'fve', 'FvH4_6g23261' => 'fve', 'FvH4_6g26900' => 'fve', 'Glyma.01G207500' => 'gma', 'Glyma.05G062200' => 'gma', 'Glyma.05G180100' => 'gma', 'Glyma.06G285400' => 'gma', 'Glyma.11G035200' => 'gma', 'Glyma.12G120300' => 'gma', 'Glyma.14G125300' => 'gma', 'Glyma.17G144000' => 'gma', 'Glyma.17G144051' => 'gma', 'Gohir.1Z049317' => 'ghi', 'Gohir.A01G019800' => 'ghi', 'Gohir.A01G019900' => 'ghi', 'Gohir.A03G153650' => 'ghi', 'Gohir.A09G196500' => 'ghi', 'Gohir.A10G085600' => 'ghi', 'Gohir.A11G027400' => 'ghi', 'Gohir.A11G200400' => 'ghi', 'Gohir.A12G139700' => 'ghi', 'Gohir.A12G215400' => 'ghi', 'Gohir.D01G018400' => 'ghi', 'Gohir.D01G018500' => 'ghi', 'Gohir.D02G176600' => 'ghi', 'Gohir.D05G284800' => 'ghi', 'Gohir.D09G191100' => 'ghi', 'Gohir.D10G100150' => 'ghi', 'Gohir.D10G102900' => 'ghi', 'Gohir.D11G026600' => 'ghi', 'Gohir.D11G223300' => 'ghi', 'Gohir.D12G144200' => 'ghi', 'Gohir.D12G218000' => 'ghi', 'Gorai.002G020600' => 'gra', 'Gorai.002G020700' => 'gra', 'Gorai.005G198300' => 'gra', 'Gorai.006G213900' => 'gra', 'Gorai.007G028900' => 'gra', 'Gorai.007G240800' => 'gra', 'Gorai.008G155500' => 'gra', 'Gorai.008G233600' => 'gra', 'Gorai.009G299600' => 'gra', 'Gorai.011G109800' => 'gra', 'Gorai.011G112800' => 'gra', 'GSVIVG01002259001' => 'vvi', 'GSVIVG01005812001' => 'vvi', 'GSVIVG01016325001' => 'vvi', 'GSVIVG01018579001' => 'vvi', 'GSVIVG01018581001' => 'vvi', 'GSVIVG01020650001' => 'vvi', 'GSVIVG01022584001' => 'vvi', 'GSVIVG01023773001' => 'vvi', 'HanXRQChr04g0099171' => 'han', 'HanXRQChr05g0148551' => 'han', 'HanXRQChr08g0227741' => 'han', 'HanXRQChr10g0306311' => 'han', 'HanXRQChr16g0501091' => 'han', 'HanXRQChr16g0505851' => 'han', 'HanXRQChr16g0526381' => 'han', 'HanXRQChr16g0526411' => 'han', 'HanXRQChr17g0565241' => 'han', 'HanXRQChr17g0565261' => 'han', 'Haze_07942' => 'cav', 'Haze_13278' => 'cav', 'Haze_24957' => 'cav', 'Hma1.2p1_0002F.1_g002410' => 'hma', 'Hma1.2p1_0308F.1_g120070' => 'hma', 'Hma1.2p1_0316F.1_g122820' => 'hma', 'Hma1.2p1_1136F.1_g260540' => 'hma', 'HPP92_009241' => 'vpl', 'HPP92_022429' => 'vpl', 'HPP92_027388' => 'vpl', 'Hund00993' => 'sun', 'Hund07850' => 'sun', 'Hund07851' => 'sun', 'Hund13639' => 'sun', 'Hund13640' => 'sun', 'Hund14578' => 'sun', 'Hund16270' => 'sun', 'Hund28547' => 'sun', 'Hund28548' => 'sun', 'Lalb_Chr03g0029731' => 'lal', 'Lalb_Chr05g0214321' => 'lal', 'Lalb_Chr05g0214331' => 'lal', 'Lalb_Chr05g0214351' => 'lal', 'Lalb_Chr05g0221141' => 'lal', 'Lalb_Chr07g0185081' => 'lal', 'Lalb_Chr07g0185091' => 'lal', 'Lalb_Chr09g0329981' => 'lal', 'Lalb_Chr12g0203721' => 'lal', 'Lalb_Chr16g0386611' => 'lal', 'Lj2g0000811' => 'lja', 'Lj3g0009326' => 'lja', 'Lj3g0024792' => 'lja', 'Lj4A885T21' => 'lonja', 'Lj4g0007078' => 'lja', 'Lj4g0020838' => 'lja', 'Lj8A106G57' => 'lonja', 'Lj8A269T38' => 'lonja', 'Lsat_1_v5_gn_1_21640' => 'lsa', 'Lsat_1_v5_gn_4_141661' => 'lsa', 'Lsat_1_v5_gn_4_28480' => 'lsa', 'Lsat_1_v5_gn_4_28500' => 'lsa', 'Lsat_1_v5_gn_4_28520' => 'lsa', 'Lsat_1_v5_gn_6_18061' => 'lsa', 'Manes.01G083700' => 'mes', 'Manes.02G041600' => 'mes', 'Manes.12G092800' => 'mes', 'Manes.12G137000' => 'mes', 'Mapoly0007s0119' => 'mpo', 'Mapoly0014s0189' => 'mpo', 'Mapoly0169s0009' => 'mpo', 'MBI05_g34471_MAGBIO' => 'mbi', 'MBI07_g06445_MAGBIO' => 'mbi', 'MCO09G755' => 'mco', 'MCO11G871' => 'mco', 'MCO15G066' => 'mco', 'MD01G1026400' => 'mdo', 'MD04G1060500' => 'mdo', 'MD09G1241300' => 'mdo', 'MD09G1241500' => 'mdo', 'MD13G1127300' => 'mdo', 'MD15G1327100' => 'mdo', 'MD17G1234100' => 'mdo', 'Medtr2g033680' => 'mtr', 'Medtr3g435700' => 'mtr', 'Medtr4g079290' => 'mtr', 'Medtr4g091440' => 'mtr', 'Medtr4g100640' => 'mtr', 'Medtr5g012920' => 'mtr', 'Medtr6g464330' => 'mtr', 'Medtr8g090375' => 'mtr', 'MELO3C005515.2' => 'cme', 'MELO3C017590.2' => 'cme', 'MELO3C019320.2' => 'cme', 'Migut.A01136' => 'egut', 'Migut.L00107' => 'egut', 'Migut.M00195' => 'egut', 'MSTRG.12124' => 'ama', 'MSTRG.15727' => 'ama', 'Nitab4.5_0000104g0310' => 'nta', 'Nitab4.5_0001381g0040' => 'nta', 'Nitab4.5_0002196g0050' => 'nta', 'Nitab4.5_0002289g0160' => 'nta', 'Nitab4.5_0003050g0030' => 'nta', 'Nitab4.5_0004120g0020' => 'nta', 'Nitab4.5_0005651g0020' => 'nta', 'Nitab4.5_0006065g0010' => 'nta', 'Nn1g04278' => 'nnu', 'Nn6g33873' => 'nnu', 'Oeu000573.1' => 'oeu', 'Oeu000574.1' => 'oeu', 'Oeu038268.1' => 'oeu', 'Oeu040705.1' => 'oeu', 'Oeu056589.1' => 'oeu', 'Oeu062951.1' => 'oeu', 'Oeu064840.1' => 'oeu', 'Os06g0103500' => 'osa', 'Os06g0354500' => 'osa', 'Os11g0605500' => 'osa', 'Peaxi162Scf00214g00048' => 'pax', 'Peaxi162Scf00241g01211' => 'pax', 'Peaxi162Scf00422g00413' => 'pax', 'PGR042G1327' => 'pgr', 'PGR102G0764' => 'pgr', 'PGR142G0739' => 'pgr', 'PGSC0003DMG400004827' => 'stu', 'PGSC0003DMG400004828' => 'stu', 'PGSC0003DMG400010548' => 'stu', 'PGSC0003DMG400020620' => 'stu', 'PGSC0003DMG400021853' => 'stu', 'Phvul.002G056700' => 'pvu', 'Phvul.002G254200' => 'pvu', 'Phvul.002G254300' => 'pvu', 'Phvul.003G222800' => 'pvu', 'Phvul.009G116400' => 'pvu', 'Phvul.011G116000' => 'pvu', 'Potri.001G155500' => 'ptr', 'Potri.003G079200' => 'ptr', 'Potri.005G077600' => 'ptr', 'Potri.007G090400' => 'ptr', 'Potri.013G123500' => 'ptr', 'Potri.019G092600' => 'ptr', 'Pp3c13_22370' => 'ppa', 'Pp3c14_14860' => 'ppa', 'Pp3c26_540' => 'ppa', 'Pp3c5_8300' => 'ppa', 'Pp3c6_21500' => 'ppa', 'PRCOL_00006639' => 'pco', 'Prupe.3G127000' => 'ppe', 'Prupe.5G065100' => 'ppe', 'Prupe.6G181800' => 'ppe', 'Prupe.7G067100' => 'ppe', 'Psat0s625g0080' => 'psa', 'Psat2g176520' => 'psa', 'Psat3g079840' => 'psa', 'Psat3g079880' => 'psa', 'Psat4g072960' => 'psa', 'Psat4g198800' => 'psa', 'Psat6g218600' => 'psa', 'Psat7g054120' => 'psa', 'Psat7g126880' => 'psa', 'Psat7g166960' => 'psa', 'Psat7g202040' => 'psa', 'PSO063G6720' => 'pso', 'PSO210G2154' => 'pso', 'PSO447G0282' => 'pso', 'PSO541G4864' => 'pso', 'PSO675G3167' => 'pso', 'PSO782G5462' => 'pso', 'QL06p049990' => 'qlo', 'QL12p011360' => 'qlo', 'RcHm_v2.0_Chr1g0336421' => 'rch', 'RcHm_v2.0_Chr2g0115091' => 'rch', 'RcHm_v2.0_Chr2g0128641' => 'rch', 'RcHm_v2.0_Chr2g0152681' => 'rch', 'RcHm_v2.0_Chr3g0481201' => 'rch', 'RcHm_v2.0_Chr3g0481221' => 'rch', 'RcHm_v2.0_Chr6g0266281' => 'rch', 'RcHm_v2.0_Chr6g0266301' => 'rch', 'RcHm_v2.0_Chr7g0204041' => 'rch', 'RcHm_v2.0_Chr7g0206361' => 'rch', 'RcHm_v2.0_Chr7g0226181' => 'rch', 'Rhsim06G0135500' => 'rsi', 'Rhsim10G0158600' => 'rsi', 'Rhsim10G0158900' => 'rsi', 'Rhsim11G0003700' => 'rsi', 'Sabra01G0125000' => 'sbr', 'Sabra01G0125200' => 'sbr', 'Sabra03G0049400' => 'sbr', 'Sabra05G0063900' => 'sbr', 'Sabra07G0074100' => 'sbr', 'Sabra13G0102500' => 'sbr', 'Sabra19G0105800' => 'sbr', 'SalBow5G0613' => 'sbo', 'SalBow5G1748' => 'sbo', 'SalBow6G3759' => 'sbo', 'SalBow7G1339' => 'sbo', 'Sc06g0009140' => 'sci', 'Sc16g0005550' => 'sci', 'Sc22g0001000' => 'sci', 'Sed0001164' => 'sed', 'Sed0007318' => 'sed', 'Sed0012317' => 'sed', 'Sed0014357' => 'sed', 'Sed0021431' => 'sed', 'Sed0023908' => 'sed', 'SEGI_01087' => 'sgi', 'SEGI_03845' => 'sgi', 'SEGI_04770' => 'sgi', 'SEGI_09162' => 'sgi', 'SEGI_12300' => 'sgi', 'SEGI_12780' => 'sgi', 'SEGI_20270' => 'sgi', 'SEGI_20994' => 'sgi', 'SEGI_21730' => 'sgi', 'SEGI_25110' => 'sgi', 'SEGI_29810' => 'sgi', 'SEGI_33260' => 'sgi', 'SEGI_35715' => 'sgi', 'SEGI_36182' => 'sgi', 'SGA_v2.0_scaffold199G41219' => 'sas', 'SGA_v2.0_scaffold258G45790' => 'sas', 'SGA_v2.0_scaffold47G17760' => 'sas', 'SHI09349' => 'shi', 'SHI09350' => 'shi', 'SHI09353' => 'shi', 'SHI09357' => 'shi', 'SMO200G0037' => 'smo', 'SMO266G0061' => 'smo', 'SMO358G0542' => 'smo', 'Solyc04g054890.3' => 'sly', 'Solyc08g078400.3' => 'sly', 'Solyc10g008110.4' => 'sly', 'Sopen04g024690' => 'spe', 'Sopen08g026880' => 'spe', 'Sopen08g026890' => 'spe', 'Sopen10g003980' => 'spe', 'Sp1g05100' => 'spa', 'Sp2g28190' => 'spa', 'Sp4g17950' => 'spa', 'Sp7g17360' => 'spa', 'TAR376G0212' => 'tar', 'TAR627G0187' => 'tar', 'TAR629G1427' => 'tar', 'THA.LOC104799116' => 'tha', 'THA.LOC104800850' => 'tha', 'THA.LOC104806669' => 'tha', 'THA.LOC104812770' => 'tha', 'THA.LOC104814467' => 'tha', 'THA.LOC104815504' => 'tha', 'Thecc.01G104500' => 'tca', 'Thecc.02G188700' => 'tca', 'Thecc.03G247900' => 'tca', 'Thhalv10003747m.g' => 'esa', 'Thhalv10006988m.g' => 'esa', 'Thhalv10009440m.g' => 'esa', 'Thhalv10016360m.g' => 'esa', 'Thhalv10024621m.g' => 'esa', 'TPR.G11115' => 'tpr', 'TPR.G11439' => 'tpr', 'TPR.G18112' => 'tpr', 'TPR.G18124' => 'tpr', 'TPR.G18139' => 'tpr', 'TPR.G20916' => 'tpr', 'TPR.G21239' => 'tpr', 'TPR.G22740' => 'tpr', 'TPR.G28902' => 'tpr', 'TPR.G34856' => 'tpr', 'TPR.G36072' => 'tpr', 'TPR.G37610' => 'tpr', 'TPR.G39553' => 'tpr', 'TPR.G984' => 'tpr', 'TWI15G0242' => 'twi', 'TWI59G1279' => 'twi', 'TWI74G1627' => 'twi', 'TWI81G0453' => 'twi', 'unitig_747.g21753' => 'ugi', 'unitig_8.g3019' => 'ugi', 'vmacro00007' => 'vma', 'vmacro12355' => 'vma', 'vmacro12356' => 'vma', 'vmacro12946' => 'vma', 'VMungo0251G0701' => 'vmu', 'VMungo0251G0971' => 'vmu', 'VMungo1127G1013' => 'vmu', 'VMungo1127G1511' => 'vmu', 'VMungo1127G1678' => 'vmu', 'VMungo1127G1906' => 'vmu', 'VMungo1215G1615' => 'vmu', 'Zm00001eb016980' => 'zma', 'Zm00001eb083480' => 'zma', 'Zm00001eb148110' => 'zma', 'Zm00001eb167230' => 'zma', 'Zm00001eb200160' => 'zma', 'Zm00001eb259720' => 'zma', 'Zm00001eb334170' => 'zma', 'Zm00001eb376020' => 'zma', 'Zm00001eb379490' => 'zma' ) ), 'data_type' => 'gene_family', 'gf_id' => 'HOM05D001068', 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D001068' ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'subfamily_family_types' => array( (int) 0 => 'ORTHOFAM' ), 'parental_family_types' => array( (int) 0 => 'HOMFAM' ), 'gene_family_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'allowed_data_types' => array( 'GO' => 'Gene Ontology', 'INTERPRO' => 'InterPro', 'GENE_FAMILY' => 'Gene Family' ) ) $sidebar_info = array( 'gf_id' => 'HOM05D001068', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '573', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $gene_selection = array( 'parameters' => array( (int) 0 => array( 'data_type' => 'GENE_FAMILY', 'data_value' => 'HOM05D001068' ) ), 'genes' => array( 'A01p20470' => 'bna', 'A03p19670' => 'bna', 'A06p31930' => 'bna', 'A09p08920' => 'bna', 'A10p05020' => 'bna', 'A10p05030' => 'bna', 'A10p05050' => 'bna', 'Aa31LG1G16860' => 'aar', 'Aa31LG1G7310' => 'aar', 'Aa31LG1G8290' => 'aar', 'Aa31LG1G8300' => 'aar', 'Aa31LG2G12940' => 'aar', 'Aa31LG9G12100' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.114' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.999' => 'aag', 'Actinidia10988' => 'ach', 'Actinidia11120' => 'ach', 'Actinidia14405' => 'ach', 'Actinidia36601' => 'ach', 'Ah.01g003900' => 'amhyb', 'Ah.02g122190' => 'amhyb', 'Ah.07g198830' => 'amhyb', 'Ah.12g054350' => 'amhyb', 'AL1G16310' => 'aly', 'AL1G16320' => 'aly', 'AL4G31770' => 'aly', 'AL575U10010' => 'aly', 'AL7G37930' => 'aly', 'AL8G42610' => 'aly', 'Aqoxy1G02246_Aqoxy1G02247' => 'aox', 'Aqoxy3G02817' => 'aox', 'Aqoxy5G01973' => 'aox', 'arahy.Tifrunner.gnm1.ann1.C7HVNL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I9A8PV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JX5WJ5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MWEA9C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PINB5K' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.QXG3RX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RDH47T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UDES1U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZPM9RR' => 'arhy', 'AT1G06290' => 'ath', 'AT1G06310' => 'ath', 'AT2G35690' => 'ath', 'AT3G06690' => 'ath', 'AT4G16760' => 'ath', 'AT5G65110' => 'ath', 'ATR0057G009' => 'atr', 'ATR0564G071' => 'atr', 'ATR0602G078' => 'atr', 'Atru.chr4.128' => 'acertr', 'Atru.chr6.2845' => 'acertr', 'Atru.chr9.1272' => 'acertr', 'AUR62002026' => 'cqu', 'AUR62003772' => 'cqu', 'AUR62007112' => 'cqu', 'AUR62019981' => 'cqu', 'AUR62035386' => 'cqu', 'AUR62035387' => 'cqu', 'AUR62036084' => 'cqu', 'AUR62036085' => 'cqu', 'AUR62036086' => 'cqu', 'BcaB01g03886' => 'bca', 'BcaB02g06786' => 'bca', 'BcaB02g06788' => 'bca', 'BcaB02g06804' => 'bca', 'BcaB02g06806' => 'bca', 'BcaB02g06807' => 'bca', 'BcaB02g09862' => 'bca', 'BcaB04g20003' => 'bca', 'BcaC01g02740' => 'bca', 'BcaC01g05713' => 'bca', 'BcaC04g23270' => 'bca', 'BcaC05g24275' => 'bca', 'BcaC05g24277' => 'bca', 'BcaC05g24278' => 'bca', 'BcaC05g24280' => 'bca', 'BcaC05g24284' => 'bca', 'BcaC05g24285' => 'bca', 'BcaC05g24286' => 'bca', 'BcaC09g50411' => 'bca', 'BcaNung00152' => 'bca', 'BolC1t02524H' => 'bol', 'BolC3t14694H' => 'bol', 'BolC3t18364H' => 'bol', 'BolC5t29234H' => 'bol', 'BolC5t29235H' => 'bol', 'BolC5t29237H' => 'bol', 'BolC5t29403H' => 'bol', 'BolC6t35390H' => 'bol', 'BolC9t53936H' => 'bol', 'BraA01t01975Z' => 'bra', 'BraA03t11221Z' => 'bra', 'BraA06t26126Z' => 'bra', 'BraA09t36543Z' => 'bra', 'BraA10t42768Z' => 'bra', 'BraA10t42769Z' => 'bra', 'BraA10t42771Z' => 'bra', 'C01p25740' => 'bna', 'C03p22930' => 'bna', 'C03p61020' => 'bna', 'C05p04620' => 'bna', 'C05p04640' => 'bna', 'C09p10360' => 'bna', 'CAN.G1178.15' => 'can', 'CAN.G725.4' => 'can', 'CAN.G782.15' => 'can', 'CANSAT01G0317' => 'cansat', 'CANSAT21G1427' => 'cansat', 'CANSAT64G0075' => 'cansat', 'CARHR005870' => 'chi', 'CARHR129930' => 'chi', 'CARHR223330' => 'chi', 'CARHR279020' => 'chi', 'Carub.0001s0566' => 'cru', 'Carub.0001s0567' => 'cru', 'Carub.0004s1742' => 'cru', 'Carub.0007s2462' => 'cru', 'Carub.0008s2595' => 'cru', 'Ca_17724_v3' => 'car', 'Ca_18909_v3' => 'car', 'Ca_21988_v3' => 'car', 'Ca_21989_v3' => 'car', 'Ca_24593_v3' => 'car', 'Ca_30457_v3' => 'car', 'CBR_g12337' => 'cbr', 'CBR_g12338' => 'cbr', 'CBR_g30062' => 'cbr', 'Cc00_g26970' => 'ccan', 'Cc05_g07930' => 'ccan', 'Cc07_g15410' => 'ccan', 'Cc08_g12140' => 'ccan', 'CDE02G3830' => 'cde', 'CDE08G0847' => 'cde', 'CDE10G0713' => 'cde', 'CDE10G1075' => 'cde', 'Cfa002686' => 'cfa', 'Cfa012691' => 'cfa', 'Cfa014679' => 'cfa', 'Cfa021966' => 'cfa', 'Ciclev10014502m.g' => 'ccl', 'Ciclev10019196m.g' => 'ccl', 'Ciclev10025052m.g' => 'ccl', 'CiPaw.03G183200' => 'cil', 'CiPaw.04G097400' => 'cil', 'CiPaw.11G081900' => 'cil', 'CiPaw.12G050100' => 'cil', 'ClCG01G004240' => 'cla', 'ClCG02G010170' => 'cla', 'ClCG07G009580' => 'cla', 'COL.COLO4_03961' => 'col', 'COL.COLO4_04705' => 'col', 'COL.COLO4_04707' => 'col', 'COL.COLO4_09938' => 'col', 'COL.COLO4_37120' => 'col', 'Cpa.g.sc20.236' => 'cpa', 'Cpa.g.sc50.2' => 'cpa', 'Cpa.g.sc89.71' => 'cpa', 'Cre05.g232002' => 'cre', 'Cre11.g467350' => 'cre', 'Cre16.g687350' => 'cre', 'Cre16.g689050' => 'cre', 'CsaV3_2G034560' => 'csa', 'CsaV3_3G020890' => 'csa', 'CsaV3_4G004730' => 'csa', 'CsaV3_5G004440' => 'csa', 'CsaV3_UNG137080' => 'csa', 'CsaV3_UNG144110' => 'csa', 'CsaV3_UNG218460' => 'csa', 'CSS0000404' => 'camsi', 'CSS0004981' => 'camsi', 'CSS0009750' => 'camsi', 'CSS0023687' => 'camsi', 'CSS0035524' => 'camsi', 'CSS0037699' => 'camsi', 'CSS0049947' => 'camsi', 'DCAR_004991' => 'dca', 'DCAR_008508' => 'dca', 'DCAR_009762' => 'dca', 'DCAR_010695' => 'dca', 'DCAR_011507' => 'dca', 'DCAR_014237' => 'dca', 'DCAR_021268' => 'dca', 'DCAR_027762' => 'dca', 'DCAR_027764' => 'dca', 'DCAR_031638' => 'dca', 'Dinv02425' => 'din', 'Dinv19990' => 'din', 'Dinv21659' => 'din', 'Dinv21927' => 'din', 'Dinv39170' => 'din', 'Dinv39171' => 'din', 'Duzib052G0179' => 'dzi', 'Duzib068G1125' => 'dzi', 'Duzib084G1186' => 'dzi', 'Duzib187G0805' => 'dzi', 'Duzib205G0096' => 'dzi', 'Duzib248G0800' => 'dzi', 'Duzib264G0741' => 'dzi', 'ECA232G2874' => 'eca', 'ECA233G2258' => 'eca', 'ECA233G3500' => 'eca', 'ECA234G0082' => 'eca', 'ECA234G1381' => 'eca', 'ECA236G4578' => 'eca', 'EL10Ac5g12342' => 'bvu', 'EL10Ac6g15077' => 'bvu', 'EL10Ac9g20848' => 'bvu', 'Eucgr.E00406' => 'egr', 'Eucgr.H04812' => 'egr', 'Eucgr.K01080' => 'egr', 'Eucgr.L03435' => 'egr', 'FAN02G0755' => 'fan', 'FAN04G2918' => 'fan', 'FAN05G2079' => 'fan', 'FAN05G5054' => 'fan', 'FAN08G3629' => 'fan', 'FAN11G2862' => 'fan', 'FAN13G2133' => 'fan', 'FAN14G5608' => 'fan', 'FAN14G5876' => 'fan', 'FAN18G2254' => 'fan', 'FAN18G2390' => 'fan', 'FAN18G3422' => 'fan', 'FAN18G4353' => 'fan', 'FAN18G4470' => 'fan', 'FAN19G2166' => 'fan', 'FAN23G2514' => 'fan', 'FAN26G0488' => 'fan', 'FAN28G1509' => 'fan', 'FvH4_1g21250' => 'fve', 'FvH4_1g27611' => 'fve', 'FvH4_3g38301' => 'fve', 'FvH4_5g19470' => 'fve', 'FvH4_5g28500' => 'fve', 'FvH4_6g23261' => 'fve', 'FvH4_6g26900' => 'fve', 'Glyma.01G207500' => 'gma', 'Glyma.05G062200' => 'gma', 'Glyma.05G180100' => 'gma', 'Glyma.06G285400' => 'gma', 'Glyma.11G035200' => 'gma', 'Glyma.12G120300' => 'gma', 'Glyma.14G125300' => 'gma', 'Glyma.17G144000' => 'gma', 'Glyma.17G144051' => 'gma', 'Gohir.1Z049317' => 'ghi', 'Gohir.A01G019800' => 'ghi', 'Gohir.A01G019900' => 'ghi', 'Gohir.A03G153650' => 'ghi', 'Gohir.A09G196500' => 'ghi', 'Gohir.A10G085600' => 'ghi', 'Gohir.A11G027400' => 'ghi', 'Gohir.A11G200400' => 'ghi', 'Gohir.A12G139700' => 'ghi', 'Gohir.A12G215400' => 'ghi', 'Gohir.D01G018400' => 'ghi', 'Gohir.D01G018500' => 'ghi', 'Gohir.D02G176600' => 'ghi', 'Gohir.D05G284800' => 'ghi', 'Gohir.D09G191100' => 'ghi', 'Gohir.D10G100150' => 'ghi', 'Gohir.D10G102900' => 'ghi', 'Gohir.D11G026600' => 'ghi', 'Gohir.D11G223300' => 'ghi', 'Gohir.D12G144200' => 'ghi', 'Gohir.D12G218000' => 'ghi', 'Gorai.002G020600' => 'gra', 'Gorai.002G020700' => 'gra', 'Gorai.005G198300' => 'gra', 'Gorai.006G213900' => 'gra', 'Gorai.007G028900' => 'gra', 'Gorai.007G240800' => 'gra', 'Gorai.008G155500' => 'gra', 'Gorai.008G233600' => 'gra', 'Gorai.009G299600' => 'gra', 'Gorai.011G109800' => 'gra', 'Gorai.011G112800' => 'gra', 'GSVIVG01002259001' => 'vvi', 'GSVIVG01005812001' => 'vvi', 'GSVIVG01016325001' => 'vvi', 'GSVIVG01018579001' => 'vvi', 'GSVIVG01018581001' => 'vvi', 'GSVIVG01020650001' => 'vvi', 'GSVIVG01022584001' => 'vvi', 'GSVIVG01023773001' => 'vvi', 'HanXRQChr04g0099171' => 'han', 'HanXRQChr05g0148551' => 'han', 'HanXRQChr08g0227741' => 'han', 'HanXRQChr10g0306311' => 'han', 'HanXRQChr16g0501091' => 'han', 'HanXRQChr16g0505851' => 'han', 'HanXRQChr16g0526381' => 'han', 'HanXRQChr16g0526411' => 'han', 'HanXRQChr17g0565241' => 'han', 'HanXRQChr17g0565261' => 'han', 'Haze_07942' => 'cav', 'Haze_13278' => 'cav', 'Haze_24957' => 'cav', 'Hma1.2p1_0002F.1_g002410' => 'hma', 'Hma1.2p1_0308F.1_g120070' => 'hma', 'Hma1.2p1_0316F.1_g122820' => 'hma', 'Hma1.2p1_1136F.1_g260540' => 'hma', 'HPP92_009241' => 'vpl', 'HPP92_022429' => 'vpl', 'HPP92_027388' => 'vpl', 'Hund00993' => 'sun', 'Hund07850' => 'sun', 'Hund07851' => 'sun', 'Hund13639' => 'sun', 'Hund13640' => 'sun', 'Hund14578' => 'sun', 'Hund16270' => 'sun', 'Hund28547' => 'sun', 'Hund28548' => 'sun', 'Lalb_Chr03g0029731' => 'lal', 'Lalb_Chr05g0214321' => 'lal', 'Lalb_Chr05g0214331' => 'lal', 'Lalb_Chr05g0214351' => 'lal', 'Lalb_Chr05g0221141' => 'lal', 'Lalb_Chr07g0185081' => 'lal', 'Lalb_Chr07g0185091' => 'lal', 'Lalb_Chr09g0329981' => 'lal', 'Lalb_Chr12g0203721' => 'lal', 'Lalb_Chr16g0386611' => 'lal', 'Lj2g0000811' => 'lja', 'Lj3g0009326' => 'lja', 'Lj3g0024792' => 'lja', 'Lj4A885T21' => 'lonja', 'Lj4g0007078' => 'lja', 'Lj4g0020838' => 'lja', 'Lj8A106G57' => 'lonja', 'Lj8A269T38' => 'lonja', 'Lsat_1_v5_gn_1_21640' => 'lsa', 'Lsat_1_v5_gn_4_141661' => 'lsa', 'Lsat_1_v5_gn_4_28480' => 'lsa', 'Lsat_1_v5_gn_4_28500' => 'lsa', 'Lsat_1_v5_gn_4_28520' => 'lsa', 'Lsat_1_v5_gn_6_18061' => 'lsa', 'Manes.01G083700' => 'mes', 'Manes.02G041600' => 'mes', 'Manes.12G092800' => 'mes', 'Manes.12G137000' => 'mes', 'Mapoly0007s0119' => 'mpo', 'Mapoly0014s0189' => 'mpo', 'Mapoly0169s0009' => 'mpo', 'MBI05_g34471_MAGBIO' => 'mbi', 'MBI07_g06445_MAGBIO' => 'mbi', 'MCO09G755' => 'mco', 'MCO11G871' => 'mco', 'MCO15G066' => 'mco', 'MD01G1026400' => 'mdo', 'MD04G1060500' => 'mdo', 'MD09G1241300' => 'mdo', 'MD09G1241500' => 'mdo', 'MD13G1127300' => 'mdo', 'MD15G1327100' => 'mdo', 'MD17G1234100' => 'mdo', 'Medtr2g033680' => 'mtr', 'Medtr3g435700' => 'mtr', 'Medtr4g079290' => 'mtr', 'Medtr4g091440' => 'mtr', 'Medtr4g100640' => 'mtr', 'Medtr5g012920' => 'mtr', 'Medtr6g464330' => 'mtr', 'Medtr8g090375' => 'mtr', 'MELO3C005515.2' => 'cme', 'MELO3C017590.2' => 'cme', 'MELO3C019320.2' => 'cme', 'Migut.A01136' => 'egut', 'Migut.L00107' => 'egut', 'Migut.M00195' => 'egut', 'MSTRG.12124' => 'ama', 'MSTRG.15727' => 'ama', 'Nitab4.5_0000104g0310' => 'nta', 'Nitab4.5_0001381g0040' => 'nta', 'Nitab4.5_0002196g0050' => 'nta', 'Nitab4.5_0002289g0160' => 'nta', 'Nitab4.5_0003050g0030' => 'nta', 'Nitab4.5_0004120g0020' => 'nta', 'Nitab4.5_0005651g0020' => 'nta', 'Nitab4.5_0006065g0010' => 'nta', 'Nn1g04278' => 'nnu', 'Nn6g33873' => 'nnu', 'Oeu000573.1' => 'oeu', 'Oeu000574.1' => 'oeu', 'Oeu038268.1' => 'oeu', 'Oeu040705.1' => 'oeu', 'Oeu056589.1' => 'oeu', 'Oeu062951.1' => 'oeu', 'Oeu064840.1' => 'oeu', 'Os06g0103500' => 'osa', 'Os06g0354500' => 'osa', 'Os11g0605500' => 'osa', 'Peaxi162Scf00214g00048' => 'pax', 'Peaxi162Scf00241g01211' => 'pax', 'Peaxi162Scf00422g00413' => 'pax', 'PGR042G1327' => 'pgr', 'PGR102G0764' => 'pgr', 'PGR142G0739' => 'pgr', 'PGSC0003DMG400004827' => 'stu', 'PGSC0003DMG400004828' => 'stu', 'PGSC0003DMG400010548' => 'stu', 'PGSC0003DMG400020620' => 'stu', 'PGSC0003DMG400021853' => 'stu', 'Phvul.002G056700' => 'pvu', 'Phvul.002G254200' => 'pvu', 'Phvul.002G254300' => 'pvu', 'Phvul.003G222800' => 'pvu', 'Phvul.009G116400' => 'pvu', 'Phvul.011G116000' => 'pvu', 'Potri.001G155500' => 'ptr', 'Potri.003G079200' => 'ptr', 'Potri.005G077600' => 'ptr', 'Potri.007G090400' => 'ptr', 'Potri.013G123500' => 'ptr', 'Potri.019G092600' => 'ptr', 'Pp3c13_22370' => 'ppa', 'Pp3c14_14860' => 'ppa', 'Pp3c26_540' => 'ppa', 'Pp3c5_8300' => 'ppa', 'Pp3c6_21500' => 'ppa', 'PRCOL_00006639' => 'pco', 'Prupe.3G127000' => 'ppe', 'Prupe.5G065100' => 'ppe', 'Prupe.6G181800' => 'ppe', 'Prupe.7G067100' => 'ppe', 'Psat0s625g0080' => 'psa', 'Psat2g176520' => 'psa', 'Psat3g079840' => 'psa', 'Psat3g079880' => 'psa', 'Psat4g072960' => 'psa', 'Psat4g198800' => 'psa', 'Psat6g218600' => 'psa', 'Psat7g054120' => 'psa', 'Psat7g126880' => 'psa', 'Psat7g166960' => 'psa', 'Psat7g202040' => 'psa', 'PSO063G6720' => 'pso', 'PSO210G2154' => 'pso', 'PSO447G0282' => 'pso', 'PSO541G4864' => 'pso', 'PSO675G3167' => 'pso', 'PSO782G5462' => 'pso', 'QL06p049990' => 'qlo', 'QL12p011360' => 'qlo', 'RcHm_v2.0_Chr1g0336421' => 'rch', 'RcHm_v2.0_Chr2g0115091' => 'rch', 'RcHm_v2.0_Chr2g0128641' => 'rch', 'RcHm_v2.0_Chr2g0152681' => 'rch', 'RcHm_v2.0_Chr3g0481201' => 'rch', 'RcHm_v2.0_Chr3g0481221' => 'rch', 'RcHm_v2.0_Chr6g0266281' => 'rch', 'RcHm_v2.0_Chr6g0266301' => 'rch', 'RcHm_v2.0_Chr7g0204041' => 'rch', 'RcHm_v2.0_Chr7g0206361' => 'rch', 'RcHm_v2.0_Chr7g0226181' => 'rch', 'Rhsim06G0135500' => 'rsi', 'Rhsim10G0158600' => 'rsi', 'Rhsim10G0158900' => 'rsi', 'Rhsim11G0003700' => 'rsi', 'Sabra01G0125000' => 'sbr', 'Sabra01G0125200' => 'sbr', 'Sabra03G0049400' => 'sbr', 'Sabra05G0063900' => 'sbr', 'Sabra07G0074100' => 'sbr', 'Sabra13G0102500' => 'sbr', 'Sabra19G0105800' => 'sbr', 'SalBow5G0613' => 'sbo', 'SalBow5G1748' => 'sbo', 'SalBow6G3759' => 'sbo', 'SalBow7G1339' => 'sbo', 'Sc06g0009140' => 'sci', 'Sc16g0005550' => 'sci', 'Sc22g0001000' => 'sci', 'Sed0001164' => 'sed', 'Sed0007318' => 'sed', 'Sed0012317' => 'sed', 'Sed0014357' => 'sed', 'Sed0021431' => 'sed', 'Sed0023908' => 'sed', 'SEGI_01087' => 'sgi', 'SEGI_03845' => 'sgi', 'SEGI_04770' => 'sgi', 'SEGI_09162' => 'sgi', 'SEGI_12300' => 'sgi', 'SEGI_12780' => 'sgi', 'SEGI_20270' => 'sgi', 'SEGI_20994' => 'sgi', 'SEGI_21730' => 'sgi', 'SEGI_25110' => 'sgi', 'SEGI_29810' => 'sgi', 'SEGI_33260' => 'sgi', 'SEGI_35715' => 'sgi', 'SEGI_36182' => 'sgi', 'SGA_v2.0_scaffold199G41219' => 'sas', 'SGA_v2.0_scaffold258G45790' => 'sas', 'SGA_v2.0_scaffold47G17760' => 'sas', 'SHI09349' => 'shi', 'SHI09350' => 'shi', 'SHI09353' => 'shi', 'SHI09357' => 'shi', 'SMO200G0037' => 'smo', 'SMO266G0061' => 'smo', 'SMO358G0542' => 'smo', 'Solyc04g054890.3' => 'sly', 'Solyc08g078400.3' => 'sly', 'Solyc10g008110.4' => 'sly', 'Sopen04g024690' => 'spe', 'Sopen08g026880' => 'spe', 'Sopen08g026890' => 'spe', 'Sopen10g003980' => 'spe', 'Sp1g05100' => 'spa', 'Sp2g28190' => 'spa', 'Sp4g17950' => 'spa', 'Sp7g17360' => 'spa', 'TAR376G0212' => 'tar', 'TAR627G0187' => 'tar', 'TAR629G1427' => 'tar', 'THA.LOC104799116' => 'tha', 'THA.LOC104800850' => 'tha', 'THA.LOC104806669' => 'tha', 'THA.LOC104812770' => 'tha', 'THA.LOC104814467' => 'tha', 'THA.LOC104815504' => 'tha', 'Thecc.01G104500' => 'tca', 'Thecc.02G188700' => 'tca', 'Thecc.03G247900' => 'tca', 'Thhalv10003747m.g' => 'esa', 'Thhalv10006988m.g' => 'esa', 'Thhalv10009440m.g' => 'esa', 'Thhalv10016360m.g' => 'esa', 'Thhalv10024621m.g' => 'esa', 'TPR.G11115' => 'tpr', 'TPR.G11439' => 'tpr', 'TPR.G18112' => 'tpr', 'TPR.G18124' => 'tpr', 'TPR.G18139' => 'tpr', 'TPR.G20916' => 'tpr', 'TPR.G21239' => 'tpr', 'TPR.G22740' => 'tpr', 'TPR.G28902' => 'tpr', 'TPR.G34856' => 'tpr', 'TPR.G36072' => 'tpr', 'TPR.G37610' => 'tpr', 'TPR.G39553' => 'tpr', 'TPR.G984' => 'tpr', 'TWI15G0242' => 'twi', 'TWI59G1279' => 'twi', 'TWI74G1627' => 'twi', 'TWI81G0453' => 'twi', 'unitig_747.g21753' => 'ugi', 'unitig_8.g3019' => 'ugi', 'vmacro00007' => 'vma', 'vmacro12355' => 'vma', 'vmacro12356' => 'vma', 'vmacro12946' => 'vma', 'VMungo0251G0701' => 'vmu', 'VMungo0251G0971' => 'vmu', 'VMungo1127G1013' => 'vmu', 'VMungo1127G1511' => 'vmu', 'VMungo1127G1678' => 'vmu', 'VMungo1127G1906' => 'vmu', 'VMungo1215G1615' => 'vmu', 'Zm00001eb016980' => 'zma', 'Zm00001eb083480' => 'zma', 'Zm00001eb148110' => 'zma', 'Zm00001eb167230' => 'zma', 'Zm00001eb200160' => 'zma', 'Zm00001eb259720' => 'zma', 'Zm00001eb334170' => 'zma', 'Zm00001eb376020' => 'zma', 'Zm00001eb379490' => 'zma' ) ) $data_type = 'gene_family' $gf_id = 'HOM05D001068' $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D001068' ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $subfamily_family_types = array( (int) 0 => 'ORTHOFAM' ) $parental_family_types = array( (int) 0 => 'HOMFAM' ) $gene_family_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $allowed_data_types = array( 'GO' => 'Gene Ontology', 'INTERPRO' => 'InterPro', 'GENE_FAMILY' => 'Gene Family' ) $data_identifier_value = 'HOM05D001068' $data_identifier_description = '' $adt_title = 'Gene Family' $adt = 'GENE_FAMILY' $is_selected = 'selected='selected'' $parameter = array( 'data_type' => 'GENE_FAMILY', 'data_value' => 'HOM05D001068' )include - APP/View/Tools/similarity_heatmap.ctp, line 77 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::render() - CORE/Cake/View/View.php, line 473 Controller::render() - CORE/Cake/Controller/Controller.php, line 963 Dispatcher::_invoke() - CORE/Cake/Routing/Dispatcher.php, line 200 Dispatcher::dispatch() - CORE/Cake/Routing/Dispatcher.php, line 167 [main] - APP/webroot/index.php, line 151