Gene: Solyc04g050240.3

General Information

Structural Information

  • Species Solanum lycopersicum
  • Gene Identifier Solyc04g050240.3
  • Transcript Identifier Solyc04g050240.3.1
  • Gene Type Coding gene
  • Location SL4.0ch04 : 45524841-45540131 : negative

Gene Family Information

  • ID HOM05D003194
  • #Genes/#Species 214/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Solyc04g050240.3.1
  • uniprot A0A3Q7G4Q5
  • gene_id Solyc04g050240

Descriptions

  • Description Vacuolar protein sorting-associated protein 26B (AHRD V3.3 *** A0A2G2Y850_CAPAN)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006886
IBA
IEA
GOA Databaseintracellular protein transport
GO:0006886
IEA
InterProintracellular protein transport
GO:0042147
IBA
GOA Databaseretrograde transport, endosome to Golgi

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005829
IEA
GOA Databasecytosol
GO:0030904
IBA
GOA Databaseretromer complex
GO:0005768
IBA
GOA Databaseendosome
GO:0043231
ISO
PLAZA Integrative Orthologyintracellular membrane-bounded organelle AT5G53530
GO:0016020
ISO
PLAZA Integrative Orthologymembrane AT5G53530
GO:0005771
ISO
PLAZA Integrative Orthologymultivesicular body AT5G53530

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR028934 Vacuolar protein sorting protein 26 related
IPR014752 Arrestin-like, C-terminal
Mapman id Description
22.4.2.1.3 Vesicle trafficking.endocytic trafficking.Retromer-mediated protein recycling.Retromer complex.component VPS26