Gene: Solyc04g011610.3

General Information

Structural Information

  • Species Solanum lycopersicum
  • Gene Identifier Solyc04g011610.3
  • Transcript Identifier Solyc04g011610.3.1
  • Gene Type Coding gene
  • Location SL4.0ch04 : 4080929-4082116 : positive

Gene Family Information

  • ID HOM05D000082
  • #Genes/#Species 3688/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Solyc04g011610.3.1
  • uniprot A0A3Q7FZK3
  • gene_id Solyc04g011610

Descriptions

  • Description RING/U-box superfamily protein (AHRD V3.3 *** A0A1I9LQQ9_ARATH)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016567
IBA
GOA Databaseprotein ubiquitination
GO:0009737
ISO
PLAZA Integrative Orthologyresponse to abscisic acid AT3G46620
GO:0010200
ISO
PLAZA Integrative Orthologyresponse to chitin AT3G46620
GO:0009414
ISO
PLAZA Integrative Orthologyresponse to water deprivation AT3G46620
GO:0051865
ISO
PLAZA Integrative Orthologyprotein autoubiquitination AT3G46620

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0061630
IBA
IEA
GOA Databaseubiquitin protein ligase activity
GO:0061630
IEA
InterProubiquitin protein ligase activity
GO:0004842
ISO
PLAZA Integrative Orthologyubiquitin-protein transferase activity AT3G46620

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005737
IBA
GOA Databasecytoplasm
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT3G46620

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR001841 Zinc finger, RING-type
IPR010543 Domain of unknown function DUF1117
IPR039525 E3 ubiquitin-protein ligase RNF126-like, zinc-ribbon
IPR013083 Zinc finger, RING/FYVE/PHD-type
Mapman id Description
19.2.2.1.4.3.3.2 Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation.ubiquitin conjugation (ubiquitylation).ubiquitin-ligase E3 activities.RING-domain E3 ligase activities.RING-H2-class ligase activities.BTL-subclass ligase