Gene: Solyc04g009600.3

General Information

Structural Information

  • Species Solanum lycopersicum
  • Gene Identifier Solyc04g009600.3
  • Transcript Identifier Solyc04g009600.3.1
  • Gene Type Coding gene
  • Location SL4.0ch04 : 3027061-3029484 : positive

Gene Family Information

  • ID HOM05D000861
  • #Genes/#Species 694/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Solyc04g009600.3.1
  • uniprot A0A3Q7FWR1
  • gene_id Solyc04g009600

Descriptions

  • Description TRAF-like superfamily protein (AHRD V3.3 *** AT3G11950.5)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006412
ISO
PLAZA Homology (enrichment)translation HOM05D000861

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0008270
IEA
GOA Databasezinc ion binding
GO:0008270
IEA
InterProzinc ion binding
GO:0046872
IEA
GOA Databasemetal ion binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005737
IEA
GOA Databasecytoplasm
GO:0009507
ISO
PLAZA Integrative Orthologychloroplast AT3G11950
GO:0009941
ISO
PLAZA Integrative Orthologychloroplast envelope AT3G11950

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR043211 TNF receptor-associated factor TRAF
IPR001293 Zinc finger, TRAF-type
IPR013083 Zinc finger, RING/FYVE/PHD-type
Mapman id Description
35.1 not assigned.annotated