Gene: Solyc04g005120.3
General Information
Structural Information
- Species Solanum lycopersicum
- Gene Identifier Solyc04g005120.3
- Transcript Identifier Solyc04g005120.3.1
- Gene Type Coding gene
- Location SL4.0ch04 : 98698-101447 : positive
Gene Family Information
- ID HOM05D004087
- #Genes/#Species 172/90
- Phylogenetic origin
- ID ORTHO05D004787
- #Genes/#Species 171/90
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid Solyc04g005120.3.1
- uniprot A0A3Q7GMR7
- gene_id Solyc04g005120
Descriptions
- Description short hypocotyl in white light1 (AHRD V3.3 *-* AT1G69935.1)
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009787 | IEA | GOA Database | regulation of abscisic acid-activated signaling pathway | |
| GO:0009787 | IEA | InterPro | regulation of abscisic acid-activated signaling pathway | |
| GO:0010100 | IEA | GOA Database | negative regulation of photomorphogenesis | |
| GO:0010100 | IEA | InterPro | negative regulation of photomorphogenesis | |
| GO:0090227 | ISO | PLAZA Integrative Orthology | regulation of red or far-red light signaling pathway | AT1G69935 |
| GO:0009958 | ISO | PLAZA Integrative Orthology | positive gravitropism | AT1G69935 |
| GO:0010380 | ISO | PLAZA Integrative Orthology | regulation of chlorophyll biosynthetic process | AT1G69935 |
| GO:1901333 | ISO | PLAZA Integrative Orthology | positive regulation of lateral root development | AT1G69935 |
| GO:0009642 | ISO | PLAZA Integrative Orthology | response to light intensity | AT1G69935 |
| GO:0048578 | ISO | PLAZA Integrative Orthology | positive regulation of long-day photoperiodism, flowering | AT1G69935 |
| GO:0031540 | ISO | PLAZA Integrative Orthology | regulation of anthocyanin biosynthetic process | AT1G69935 |
| GO:0009416 | ISO | PLAZA Integrative Orthology | response to light stimulus | AT1G69935 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT1G69935 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0016021 | IEA | GOA Database | integral component of membrane | |
| GO:0016020 | IEA | GOA Database | membrane | |
| GO:0005634 | ISO | PLAZA Integrative Orthology | nucleus | AT1G69935 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR039324 | Protein SHORT HYPOCOTYL IN WHITE LIGHT 1 |
| Mapman id | Description |
|---|---|
| 35.1 | not assigned.annotated |