Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc04g005120.3 Solanum lycopersicum HOM05D004087 ORTHO05D004787 5.2e-86 321.2 188 100.0
Sopen04g001140 Solanum pennellii HOM05D004087 ORTHO05D004787 1.4e-83 313.2 188 97.9
CAN.G300.5 Capsicum annuum HOM05D004087 ORTHO05D004787 9.2e-59 230.7 194 78.9
Nitab4.5_0000710g0070 Nicotiana tabacum HOM05D004087 ORTHO05D004787 1.2e-55 220.3 195 73.8
Manes.05G094600 Manihot esculenta HOM05D004087 ORTHO05D004787 2.0e-42 176.4 160 60.0
Peaxi162Scf00187g00617 Petunia axillaris HOM05D004087 ORTHO05D004787 2.5e-40 169.5 109 87.2
PGSC0003DMG400001914 Solanum tuberosum HOM05D000067 ORTHO05D000097 2.1e-39 166.4 184 64.7
CiPaw.06G078300 Carya illinoinensis HOM05D004087 ORTHO05D004787 3.6e-39 165.6 196 53.1
Potri.008G190900 Populus trichocarpa HOM05D004087 ORTHO05D004787 2.6e-37 159.5 186 51.6
Cpa.g.sc5.304 Carica papaya HOM05D004087 ORTHO05D004787 1.7e-36 156.8 181 50.8
Glyma.01G039100 Glycine max HOM05D004087 ORTHO05D004787 3.7e-36 155.6 146 57.5
Lalb_Chr05g0217411 Lupinus albus HOM05D004087 ORTHO05D004787 3.7e-36 155.6 195 51.8
Actinidia01168 Actinidia chinensis HOM05D004087 ORTHO05D004787 4.9e-36 155.2 204 51.5
GSVIVG01020122001 Vitis vinifera HOM05D004087 ORTHO05D004787 1.9e-35 153.3 148 56.8
Gohir.D04G136500 Gossypium hirsutum HOM05D004087 ORTHO05D004787 3.2e-35 152.5 157 56.1
Gorai.012G120300 Gossypium raimondii HOM05D004087 ORTHO05D004787 3.2e-35 152.5 157 56.1
Phvul.002G079300 Phaseolus vulgaris HOM05D004087 ORTHO05D004787 2.7e-34 149.4 146 55.5
VMungo1215G1106 Vigna mungo HOM05D004087 ORTHO05D004787 3.5e-34 149.1 146 56.2
COL.COLO4_36242 Corchorus olitorius HOM05D004087 ORTHO05D004787 2.3e-33 146.4 108 70.4
Cfa009049 Carpinus fangiana HOM05D004087 ORTHO05D004787 8.6e-33 144.4 140 57.1
Ciclev10032809m.g Citrus clementina HOM05D004087 ORTHO05D004787 1.9e-32 143.3 147 55.1
Glyma.02G025600 Glycine max HOM05D004087 ORTHO05D004787 1.9e-32 143.3 146 57.5
TAR622G0570 Trochodendron aralioides HOM05D004087 ORTHO05D004787 1.9e-32 143.3 145 55.2
Eucgr.B02582 Eucalyptus grandis HOM05D004087 ORTHO05D004787 3.3e-32 142.5 105 67.6
PGR119G1273 Punica granatum HOM05D004087 ORTHO05D004787 4.3e-32 142.1 107 66.4
Haze_12080 Corylus avellana HOM05D004087 ORTHO05D004787 5.6e-32 141.7 163 51.5
Sabra08G0144800 Salix brachista HOM05D004087 ORTHO05D004787 7.3e-32 141.4 146 54.8
Hma1.2p1_0289F.1_g114450 Hydrangea macrophylla HOM05D004087 ORTHO05D004787 1.2e-31 140.6 128 62.5
Lj2g0011291 Lotus japonicus HOM05D004087 ORTHO05D004787 2.1e-31 139.8 102 70.6
Aqoxy3G03190 Aquilegia oxysepala HOM05D004087 ORTHO05D004787 2.8e-31 139.4 171 55.0
TPR.G26706 Trifolium pratense HOM05D004087 ORTHO05D004787 3.6e-31 139.0 140 54.3
Medtr5g037230 Medicago truncatula HOM05D004087 ORTHO05D004787 1.8e-30 136.7 101 66.3
Atru.chr11.1891 Acer truncatum HOM05D004087 ORTHO05D004787 6.8e-30 134.8 122 62.3
arahy.Tifrunner.gnm1.ann1.0DC02M Arachis hypogaea HOM05D004087 ORTHO05D004787 3.4e-29 132.5 98 70.4
arahy.Tifrunner.gnm1.ann1.F53DZL Arachis hypogaea HOM05D004087 ORTHO05D004787 3.4e-29 132.5 98 70.4
THA.LOC104822080 Tarenaya hassleriana HOM05D004087 ORTHO05D004787 3.4e-29 132.5 102 64.7
MBI01_g41231_MAGBIO Magnolia biondii HOM05D004087 ORTHO05D004787 5.8e-29 131.7 142 54.2
PSO591G0142 Papaver somniferum HOM05D004087 ORTHO05D004787 2.2e-28 129.8 107 65.4
Psat2g117160 Pisum sativum HOM05D004087 ORTHO05D004787 3.8e-28 129.0 101 62.4
Nitab4.5_0013199g0010 Nicotiana tabacum HOM05D004087 ORTHO05D004787 4.9e-28 128.6 145 63.4
PSO832G0995 Papaver somniferum HOM05D004087 ORTHO05D004787 6.4e-28 128.3 109 65.1
Dinv24938 Davidia involucrata HOM05D004087 ORTHO05D004787 1.1e-27 127.5 95 70.5
Carub.0002s1665 Capsella rubella HOM05D004087 ORTHO05D004787 1.7e-25 120.2 93 64.5
Rhsim12G0127500 Rhododendron simsii HOM05D004087 ORTHO05D004787 1.7e-25 120.2 205 45.4
Thhalv10019201m.g Eutrema salsugineum HOM05D004087 ORTHO05D004787 3.0e-25 119.4 93 65.6
AL2G29180 Arabidopsis lyrata HOM05D004087 ORTHO05D004787 3.9e-25 119.0 93 63.4
BcaB03g14773 Brassica carinata HOM05D004087 ORTHO05D004787 8.6e-25 117.9 93 63.4
C06p43810 Brassica napus HOM05D004087 ORTHO05D004787 8.6e-25 117.9 93 63.4
Nn1g03866 Nelumbo nucifera HOM05D004087 ORTHO05D004787 8.6e-25 117.9 152 51.3
AT1G69935 Arabidopsis thaliana HOM05D004087 ORTHO05D004787 1.1e-24 117.5 93 62.4
BcaC08g46444 Brassica carinata HOM05D004087 ORTHO05D004787 2.5e-24 116.3 169 45.0
A07p36390 Brassica napus HOM05D004087 ORTHO05D004787 2.5e-24 116.3 93 62.4
BolC6t39453H Brassica oleracea HOM05D004087 ORTHO05D004787 2.5e-24 116.3 169 45.0
Sp5g25060 Schrenkiella parvula HOM05D004087 ORTHO05D004787 2.5e-24 116.3 93 62.4
BraA07t31211Z Brassica rapa HOM05D004087 ORTHO05D004787 3.3e-24 115.9 93 62.4
CARHR063040 Cardamine hirsuta HOM05D004087 ORTHO05D004787 4.3e-24 115.5 184 48.4
Prupe.8G150800 Prunus persica HOM05D004087 ORTHO05D004787 1.8e-22 110.2 144 55.6
Sc05g0005570 Simmondsia chinensis HOM05D004087 ORTHO05D004787 1.8e-22 110.2 89 67.4
Eucgr.G01187 Eucalyptus grandis HOM05D004087 ORTHO05D004787 2.4e-22 109.8 89 66.3
CANSAT25G1673 Cannabis sativa HOM05D004087 ORTHO05D004787 6.9e-22 108.2 110 52.7
HanXRQChr17g0551501 Helianthus annuus HOM05D004087 ORTHO05D004787 6.9e-22 108.2 110 54.5
Oeu028917.1 Olea europaea HOM05D004087 ORTHO05D004787 9.0e-22 107.8 89 61.8
Gohir.D02G203142 Gossypium hirsutum HOM05D003497 ORTHO05D004787 1.2e-21 107.5 89 65.2
TAR628G1056 Trochodendron aralioides HOM05D000194 ORTHO05D000069 1.5e-21 107.1 87 64.4
RcHm_v2.0_Chr6g0248281 Rosa chinensis HOM05D004087 ORTHO05D004787 2.0e-21 106.7 144 54.2
ATR0739G081 Amborella trichopoda HOM05D004087 ORTHO05D004787 2.6e-21 106.3 100 57.0
Aqoxy6G02440 Aquilegia oxysepala HOM05D004087 ORTHO05D004787 2.6e-21 106.3 112 54.5
Manes.10G087100 Manihot esculenta HOM05D004087 ORTHO05D004787 2.6e-21 106.3 89 62.9
Ah.01g007120 Amaranthus hybridus HOM05D004087 ORTHO05D004787 3.4e-21 105.9 111 54.1
Gorai.005G229700 Gossypium raimondii HOM05D003497 ORTHO05D003964 3.4e-21 105.9 89 64.0
GSVIVG01037047001 Vitis vinifera HOM05D004087 ORTHO05D004787 3.4e-21 105.9 112 52.7
PSO017G3065 Papaver somniferum HOM05D004087 ORTHO05D004787 4.4e-21 105.5 102 57.8
PSO170G3120 Papaver somniferum HOM05D004087 ORTHO05D004787 4.4e-21 105.5 102 57.8
Potri.001G289600 Populus trichocarpa HOM05D004087 ORTHO05D004787 4.4e-21 105.5 137 51.8
Atru.chr5.2274 Acer truncatum HOM05D004087 ORTHO05D004787 7.6e-21 104.8 89 60.7
CiPaw.05G021000 Carya illinoinensis HOM05D004087 ORTHO05D004787 7.6e-21 104.8 110 53.6
Gohir.A03G180900 Gossypium hirsutum HOM05D003497 ORTHO05D003964 7.6e-21 104.8 89 64.0
Carub.0007s0665 Capsella rubella HOM05D004087 ORTHO05D004787 9.9e-21 104.4 114 57.0
CDE06G2321 Ceratophyllum demersum HOM05D001904 ORTHO05D001854 9.9e-21 104.4 101 57.4
Hma1.2p1_0661F.1_g198070 Hydrangea macrophylla HOM05D004087 ORTHO05D004787 9.9e-21 104.4 112 52.7
Nn5g30675 Nelumbo nucifera HOM05D004087 ORTHO05D004787 9.9e-21 104.4 89 61.8
THA.LOC104807209 Tarenaya hassleriana HOM05D004087 ORTHO05D004787 9.9e-21 104.4 112 55.4
CARHR241870 Cardamine hirsuta HOM05D004087 ORTHO05D004787 1.3e-20 104.0 117 58.1
BcaNung04672 Brassica carinata HOM05D004087 ORTHO05D004787 1.7e-20 103.6 183 47.5
CSS0031122 Camellia sinensis var. sinensis HOM05D004087 ORTHO05D004787 1.7e-20 103.6 110 51.8
Ciclev10029333m.g Citrus clementina HOM05D004087 ORTHO05D004787 1.7e-20 103.6 110 53.6
COL.COLO4_32481 Corchorus olitorius HOM05D004087 ORTHO05D004787 1.7e-20 103.6 89 60.7
Glyma.01G241400 Glycine max HOM05D004087 ORTHO05D004787 1.7e-20 103.6 90 61.1
CDE04G2047 Ceratophyllum demersum HOM05D004087 ORTHO05D004787 2.2e-20 103.2 100 58.0
Duzib132G0587 Durio zibethinus HOM05D004087 ORTHO05D004787 2.2e-20 103.2 87 63.2
FvH4_2g03150 Fragaria vesca HOM05D004087 ORTHO05D004787 2.2e-20 103.2 103 56.3
FAN15G0324 Fragaria x ananassa HOM05D004087 ORTHO05D004787 2.2e-20 103.2 103 56.3
FAN20G2318 Fragaria x ananassa HOM05D004087 ORTHO05D004787 2.2e-20 103.2 103 56.3
Hund06503 Selenicereus undatus HOM05D004087 ORTHO05D004787 2.2e-20 103.2 89 60.7
Hund06504 Selenicereus undatus HOM05D004087 ORTHO05D004787 2.2e-20 103.2 89 60.7
ECA236G0105 Erigeron canadensis HOM05D004087 ORTHO05D004787 2.9e-20 102.8 107 53.3
Thhalv10026262m.g Eutrema salsugineum HOM05D004087 ORTHO05D004787 2.9e-20 102.8 93 61.3
PGR042G2373 Punica granatum HOM05D004087 ORTHO05D004787 2.9e-20 102.8 87 62.1
Cfa004696 Carpinus fangiana HOM05D004087 ORTHO05D004787 3.8e-20 102.4 85 62.4
FAN24G1045 Fragaria x ananassa HOM05D004087 ORTHO05D004787 3.8e-20 102.4 105 55.2
FAN27G0771 Fragaria x ananassa HOM05D004087 ORTHO05D004787 3.8e-20 102.4 103 56.3
Lsat_1_v5_gn_7_84781 Lactuca sativa HOM05D004087 ORTHO05D004787 3.8e-20 102.4 118 50.8
QL11p029242 Quercus lobata HOM05D004087 ORTHO05D004787 3.8e-20 102.4 108 51.9
Aa31sc355G20 Aethionema arabicum HOM05D004087 ORTHO05D004787 4.9e-20 102.1 179 50.3
AL7G17680 Arabidopsis lyrata HOM05D004087 ORTHO05D004787 4.9e-20 102.1 89 62.9
AT4G33780 Arabidopsis thaliana HOM05D004087 ORTHO05D004787 4.9e-20 102.1 89 62.9
Dinv09536 Davidia involucrata HOM05D004087 ORTHO05D004787 4.9e-20 102.1 112 51.8
Thecc.02G120300 Theobroma cacao HOM05D004087 ORTHO05D004787 4.9e-20 102.1 87 60.9
Cc02_g20080 Coffea canephora HOM05D004087 ORTHO05D004787 6.4e-20 101.7 87 58.6
TWI59G0284 Tripterygium wilfordii HOM05D004087 ORTHO05D004787 6.4e-20 101.7 85 63.5
Actinidia00355 Actinidia chinensis HOM05D004087 ORTHO05D004787 8.4e-20 101.3 110 50.9
Sp7g31520 Schrenkiella parvula HOM05D004087 ORTHO05D004787 8.4e-20 101.3 180 45.0
Sed0019763 Sechium edule HOM05D004087 ORTHO05D004787 8.4e-20 101.3 182 45.6
Solyc01g106810.4 Solanum lycopersicum HOM05D004087 ORTHO05D004787 8.4e-20 101.3 89 56.2
Sopen01g049120 Solanum pennellii HOM05D004087 ORTHO05D004787 8.4e-20 101.3 89 56.2
BcaC09g52189 Brassica carinata HOM05D000477 ORTHO05D000338 1.1e-19 100.9 89 62.9
C01p04920 Brassica napus HOM05D004087 ORTHO05D004787 1.1e-19 100.9 89 62.9
BolC1t00476H Brassica oleracea HOM05D004087 ORTHO05D004787 1.1e-19 100.9 89 62.9
MBI16_g37623_MAGBIO Magnolia biondii HOM05D004087 ORTHO05D004787 1.4e-19 100.5 110 53.6
ClCG02G007130 Citrullus lanatus HOM05D004087 ORTHO05D004787 1.9e-19 100.1 91 58.2
Migut.B00471 Erythranthe guttata HOM05D004087 ORTHO05D004787 1.9e-19 100.1 106 51.9
BcaNung02921 Brassica carinata HOM05D004087 ORTHO05D004787 2.4e-19 99.8 87 63.2
A03p62320 Brassica napus HOM05D004087 ORTHO05D004787 2.4e-19 99.8 87 63.2
BolC7t46432H Brassica oleracea HOM05D004087 ORTHO05D004787 2.4e-19 99.8 87 63.2
BraA03t15307Z Brassica rapa HOM05D004087 ORTHO05D004787 2.4e-19 99.8 87 63.2
Phvul.002G050600 Phaseolus vulgaris HOM05D004087 ORTHO05D004787 2.4e-19 99.8 89 59.6
PGSC0003DMG400025835 Solanum tuberosum HOM05D004087 ORTHO05D004787 2.4e-19 99.8 87 57.5
C07p59880 Brassica napus HOM05D004087 ORTHO05D004787 3.2e-19 99.4 186 45.7
BraA01t00439Z Brassica rapa HOM05D004087 ORTHO05D004787 4.2e-19 99.0 183 46.4
BcaNung04326 Brassica carinata HOM05D004087 ORTHO05D004787 7.1e-19 98.2 86 62.8
CsaV3_7G007690 Cucumis sativus L. HOM05D004087 ORTHO05D004787 7.1e-19 98.2 91 57.1
Duzib268G0252 Durio zibethinus HOM05D004087 ORTHO05D004787 9.3e-19 97.8 144 47.9
Nitab4.5_0000772g0090 Nicotiana tabacum HOM05D004087 ORTHO05D004787 9.3e-19 97.8 89 57.3
Ca_28186_v3 Cicer arietinum L. HOM05D004087 ORTHO05D004787 6.0e-18 95.1 78 64.1
Peaxi162Scf00016g03121 Petunia axillaris HOM05D004087 ORTHO05D004787 6.0e-18 95.1 110 50.0
vmacro16306 Vaccinium macrocarpon HOM05D004087 ORTHO05D004787 8.7e-17 91.3 74 66.2
Zm00001eb009500 Zea mays HOM05D004087 ORTHO05D004787 8.7e-17 91.3 87 54.0
Sabra16G0181200 Salix brachista HOM05D004087 ORTHO05D004787 1.5e-16 90.5 138 44.2
BcaC03g14363 Brassica carinata HOM05D004087 ORTHO05D004787 1.6e-15 87.0 87 60.9
AUR62027025 Chenopodium quinoa HOM05D003497 ORTHO05D003964 1.6e-15 87.0 77 61.0
QL03p066700 Quercus lobata HOM05D004087 ORTHO05D004787 2.1e-15 86.7 63 69.8
Nitab4.5_0009103g0030 Nicotiana tabacum HOM05D004087 ORTHO05D004787 6.2e-15 85.1 106 47.2
MD05G1106700 Malus domestica HOM05D004087 ORTHO05D004787 1.4e-14 84.0 82 56.1
BolC2t07908H Brassica oleracea HOM05D004087 ORTHO05D004787 2.4e-14 83.2 72 66.7
DCAR_021942 Daucus carota HOM05D004087 ORTHO05D004787 2.6e-13 79.7 207 38.2
SGA_v2.0_scaffold32G12983 Striga asiatica HOM05D004087 ORTHO05D004787 3.4e-13 79.3 92 47.8
SalBow6G0931 Salvia bowleyana HOM05D004087 ORTHO05D004787 9.9e-13 77.8 73 52.1
EL10Ac9g22175 Beta vulgaris HOM05D004087 ORTHO05D004787 1.4e-11 73.9 62 64.5
C02p17780 Brassica napus HOM05D004087 ORTHO05D004787 4.2e-11 72.4 64 65.6
MD10G1111500 Malus domestica HOM05D004087 ORTHO05D004787 1.2e-10 70.9 103 57.3
Gohir.A13G047950 Gossypium hirsutum HOM05D004087 ORTHO05D004787 1.6e-10 70.5 62 64.5
VMungo1215G2093 Vigna mungo HOM05D004087 ORTHO05D004787 2.7e-10 69.7 60 65.0
A01p04540 Brassica napus HOM05D004087 ORTHO05D004787 3.5e-10 69.3 156 45.5
MELO3C018531.2 Cucumis melo HOM05D004087 ORTHO05D004787 3.5e-10 69.3 60 61.7
TWI36G1524 Tripterygium wilfordii HOM05D004087 ORTHO05D004787 3.5e-10 69.3 82 50.0
Gohir.A04G096700 Gossypium hirsutum HOM05D004087 ORTHO05D004787 4.6e-10 68.9 91 46.2
AagrBONN_evm.TU.Sc2ySwM_344.3821 Anthoceros agrestis HOM05D004087 ORTHO05D004787 6.7e-09 65.1 84 41.7
Mapoly0011s0173 Marchantia polymorpha HOM05D004087 ORTHO05D004787 1.1e-08 64.3 98 33.7
unitig_0.g632 Utricularia gibba HOM05D004087 ORTHO05D004787 1.5e-08 63.9 83 51.8
vmacro01944 Vaccinium macrocarpon HOM05D004087 ORTHO05D004787 6.2e-07 58.5 51 56.9
CSS0038746 Camellia sinensis var. sinensis HOM05D004087 ORTHO05D004787 1.8e-06 57.0 133 47.4


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