Gene: Solyc03g122170.4
General Information
Structural Information
- Species Solanum lycopersicum
- Gene Identifier Solyc03g122170.4
- Transcript Identifier Solyc03g122170.4.1
- Gene Type Coding gene
- Location SL4.0ch03 : 64528923-64532785 : positive
Gene Family Information
- ID HOM05D000945
- #Genes/#Species 634/100
- Phylogenetic origin
- ID ORTHO05D000919
- #Genes/#Species 553/100
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
Labels
Identifiers
- tid Solyc03g122170.4.1
- uniprot A0A3Q7FXP1
- gene_id Solyc03g122170
Descriptions
- Description Peroxisomal (S)-2-hydroxy-acid oxidase GLO4 (AHRD V3.3 *** A0A2G2WQ07_CAPBA)
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009853 | IEA | GOA Database | photorespiration | |
| GO:0050665 | ISO | PLAZA Integrative Orthology | hydrogen peroxide biosynthetic process | AT3G14130 |
| GO:0042742 | ISO | PLAZA Integrative Orthology | defense response to bacterium | AT3G14130 |
| GO:0002758 | ISO | PLAZA Integrative Orthology | innate immune response-activating signal transduction | AT3G14150 |
| GO:0009854 | IEA | GOA Database | oxidative photosynthetic carbon pathway |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | Os07g0616500 |
| GO:0016491 | IEA | GOA Database | oxidoreductase activity | |
| GO:0016491 | IEA | InterPro | oxidoreductase activity | |
| GO:0003824 | IEA | GOA Database | catalytic activity | |
| GO:0003824 | IEA | InterPro | catalytic activity | |
| GO:0010181 | IEA | GOA Database | FMN binding | |
| GO:0010181 | IEA | InterPro | FMN binding | |
| GO:0052852 | IEA | GOA Database | very-long-chain-(S)-2-hydroxy-acid oxidase activity | |
| GO:0052853 | IEA | GOA Database | long-chain-(S)-2-hydroxy-long-chain-acid oxidase activity | |
| GO:0052854 | IEA | GOA Database | medium-chain-(S)-2-hydroxy-acid oxidase activity | |
| GO:0003973 | IEA | GOA Database | (S)-2-hydroxy-acid oxidase activity |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005777 | ISO | PLAZA Integrative Orthology | peroxisome | AT3G14130 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 50.1.1 | Enzyme classification.EC_1 oxidoreductases.EC_1.1 oxidoreductase acting on CH-OH group of donor |