Gene: Solyc03g114900.3

General Information

Structural Information

Species Solanum lycopersicum
Gene Identifier Solyc03g114900.3
Transcript Identifier Solyc03g114900.3.1
Gene Type Coding gene
Location SL4.0ch03 : 59194158-59195888 : positive

Gene Family Information

Homologous GF
Orthologous GF

ID HOM05D000600
#Genes/#Species 940/96
Phylogenetic origin

ID ORTHO05D000432
#Genes/#Species 939/97
Phylogenetic origin

Gene Duplication Information

Tandem Duplication Tandem duplicate
Block Duplication Block duplicate

Labels

Identifiers

tid Solyc03g114900.3.1
uniprot A0A3Q7GGF8
gene_id Solyc03g114900

Descriptions

Short descriptions
Ortholog descriptions

Description COBRA-like protein (AHRD V3.3 *** K4BKZ2_SOLLC)

Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0010215	IEA	GOA Database	cellulose microfibril organization
GO:0010215	IEA	InterPro	cellulose microfibril organization
GO:0052324	IBA	GOA Database	plant-type cell wall cellulose biosynthetic process
GO:0002239	ISO	PLAZA Integrative Orthology	response to oomycetes	AT5G60950
GO:0009834	ISO	PLAZA Integrative Orthology	plant-type secondary cell wall biogenesis	AT5G15630

Cellular Component

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0031225	IEA	GOA Database	anchored component of membrane
GO:0031225	IEA	InterPro	anchored component of membrane
GO:0046658	IBA	GOA Database	anchored component of plasma membrane
GO:0005774	ISO	PLAZA Integrative Orthology	vacuolar membrane	AT5G15630
GO:0005886	ISO	PLAZA Integrative Orthology	plasma membrane	AT5G15630

Color Legend

Experimental Evidence

Computational Reviewed Evidence

Electronic Evidence

InterPro	Description
IPR006918	COBRA, plant

Mapman id	Description
21.1.2.2	Cell wall organisation.cellulose.cellulose-hemicellulose network assembly.regulatory protein (COB)