Gene: Solyc03g083240.4
General Information
Structural Information
- Species Solanum lycopersicum
- Gene Identifier Solyc03g083240.4
- Transcript Identifier Solyc03g083240.4.1
- Gene Type Coding gene
- Location SL4.0ch03 : 47671405-47679761 : positive
Gene Family Information
- ID HOM05D000451
- #Genes/#Species 1160/99
- Phylogenetic origin
- ID ORTHO05D000351
- #Genes/#Species 1073/99
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid Solyc03g083240.4.1
- uniprot A0A3Q7GA66
- gene_id Solyc03g083240
Descriptions
- Description Transcription factor jumonji (JmjC) domain-containing protein (AHRD V3.3 *** Q8VYB9_ARATH)
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0033169 | IEA | InterPro | histone H3-K9 demethylation | |
| GO:0042742 | ISO | PLAZA Integrative Orthology | defense response to bacterium | AT4G00990 |
| GO:2000028 | ISO | PLAZA Integrative Orthology | regulation of photoperiodism, flowering | AT4G00990 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0032454 | IEA | InterPro | histone demethylase activity (H3-K9 specific) | |
| GO:0003677 | IEA | GOA Database | DNA binding |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 12.3.3.8.1 | Chromatin organisation.post-translational histone modification.histone lysine methylation.JmjC group histone demethylase activities.histone demethylase (KDM3) |