Gene: Solyc03g071570.3
General Information
Structural Information
- Species Solanum lycopersicum
- Gene Identifier Solyc03g071570.3
- Transcript Identifier Solyc03g071570.3.1
- Gene Type Coding gene
- Location SL4.0ch03 : 15060725-15064458 : negative
Gene Family Information
- ID HOM05D000131
- #Genes/#Species 2694/97
- Phylogenetic origin
- ID ORTHO05D000086
- #Genes/#Species 2333/97
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid Solyc03g071570.3.1
- uniprot A0A3Q7G8N0
- gene_id Solyc03g071570
Descriptions
- Description Pectate lyase (AHRD V3.3 *** A0A2G2X594_CAPBA)
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0045490 | IEA | GOA Database | pectin catabolic process | |
| GO:0042547 | ISO | PLAZA Integrative Orthology | cell wall modification involved in multidimensional cell growth | AT3G54920 |
| GO:0098542 | ISO | PLAZA Integrative Orthology | defense response to other organism | AT3G54920 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0030570 | IEA | GOA Database | pectate lyase activity | |
| GO:0030570 | IEA | InterPro | pectate lyase activity | |
| GO:0046872 | IEA | GOA Database | metal ion binding | |
| GO:0016829 | IEA | GOA Database | lyase activity |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0016021 | IEA | GOA Database | integral component of membrane | |
| GO:0016020 | IEA | GOA Database | membrane | |
| GO:0031225 | ISO | PLAZA Integrative Orthology | anchored component of membrane | AT3G54920 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 21.3.5.2 | Cell wall organisation.pectin.modification and degradation.pectate lyase |