Gene: Solyc02g090420.2

General Information

Structural Information

Species Solanum lycopersicum
Gene Identifier Solyc02g090420.2
Transcript Identifier Solyc02g090420.2.1
Gene Type Coding gene
Location SL4.0ch02 : 50024691-50027803 : positive

Gene Family Information

Homologous GF
Orthologous GF

ID HOM05D002485
#Genes/#Species 274/97
Phylogenetic origin

ID ORTHO05D002629
#Genes/#Species 274/95
Phylogenetic origin

Gene Duplication Information

Tandem Duplication Tandem duplicate

Labels

Identifiers

tid Solyc02g090420.2.1
uniprot K4BCJ1
gene_id Solyc02g090420

Descriptions

Short descriptions
Ortholog descriptions

Description 50S ribosomal protein L25 (AHRD V3.3 *** A0A1J3IIM4_NOCCA)

Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0006412	IBA IEA	GOA Database	translation
GO:0006412	IEA	InterPro	translation

Molecular Function

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0003735	IEA	GOA Database	structural constituent of ribosome
GO:0003735	IEA	InterPro	structural constituent of ribosome
GO:0008097	IBA IEA	GOA Database	5S rRNA binding
GO:0008097	IEA	InterPro	5S rRNA binding
GO:0003729	ISO	PLAZA Integrative Orthology	mRNA binding	AT5G66860

Cellular Component

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0005840	IEA	GOA Database	ribosome
GO:0005840	IEA	InterPro	ribosome
GO:0022625	IBA	GOA Database	cytosolic large ribosomal subunit
GO:0005739	ISO	PLAZA Integrative Orthology	mitochondrion	AT5G66860

Color Legend

Experimental Evidence

Computational Reviewed Evidence

Electronic Evidence

InterPro	Description
IPR011035	Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain superfamily
IPR029751	Ribosomal protein L25
IPR020057	Ribosomal protein L25, beta domain
IPR037121	Ribosomal protein L25, C-terminal

Mapman id	Description
35.1	not assigned.annotated