Gene: Solyc02g088910.3

General Information

Structural Information

  • Species Solanum lycopersicum
  • Gene Identifier Solyc02g088910.3
  • Transcript Identifier Solyc02g088910.3.1
  • Gene Type Coding gene
  • Location SL4.0ch02 : 48881071-48883364 : negative

Gene Family Information

  • ID HOM05D000813
  • #Genes/#Species 727/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Solyc02g088910.3.1
  • uniprot A0A3Q7F998
  • gene_id Solyc02g088910

Descriptions

  • Description Ninja-family protein AFP3 (AHRD V3.3 *** A0A1J3DL53_NOCCA)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0007165
IEA
GOA Databasesignal transduction
GO:0007165
IEA
InterProsignal transduction
GO:0045892
IBA
GOA Databasenegative regulation of transcription, DNA-templated
GO:0009737
IBA
GOA Databaseresponse to abscisic acid
GO:0010581
ISO
PLAZA Integrative Orthologyregulation of starch biosynthetic process AT3G02140
GO:0009651
ISO
PLAZA Integrative Orthologyresponse to salt stress AT3G02140
GO:0009788
ISO
PLAZA Integrative Orthologynegative regulation of abscisic acid-activated signaling pathway AT3G02140

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT3G02140

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IBA
IEA
GOA Databasenucleus

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR032310 Putative nuclear localisation signal
IPR031307 Ninja family
IPR032308 Jas TPL-binding domain
IPR012463 Ethylene-responsive binding factor-associated repression
Mapman id Description
15.5.51.3 RNA biosynthesis.transcriptional regulation.transcriptional repression.transcriptional co-repressor (AFP/NINJA)